RNA–Protein interactions for RNA: ENST00000478189.1

HLA-DPB1-215, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-215ENST00000478189 KLHDC9Q8NEP7 349 aa20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 NUP133Q8WUM0 1156 aa20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 PIGSQ96S52 555 aa20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 AMNQ9BXJ7 453 aa20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 UPF3AQ9H1J1 476 aaKnown RBP20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 ADD3Q9UEY8 706 aaKnown RBP20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 PHF24Q9UPV7 400 aa20.48■□□□□ 0.87
HLA-DPB1-215ENST00000478189 KIAA1217Q5T5P2 1943 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 CTAGE5O15320 804 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 MYCNP04198 464 aaPredicted RBP20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 RXRAP19793 462 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 PTGS1P23219 599 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 ADCYAP1R1P41586 468 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 TMEM63BQ5T3F8 832 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 HOMER1Q86YM7 354 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 DNERQ8NFT8 737 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 MRPL11Q9Y3B7 192 aaKnown RBP20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 NR2E3Q9Y5X4 410 aa20.47■□□□□ 0.87
HLA-DPB1-215ENST00000478189 CCDC69A6NI79 296 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 CST5P28325 142 aaPredicted RBP20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 NKX3-2P78367 333 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 KRT32Q14532 448 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 SNX17Q15036 470 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 NFXL1Q6ZNB6 911 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 DHX32Q7L7V1 743 aaKnown RBP20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 EEPD1Q7L9B9 569 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 RNF180Q86T96 592 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 TMTC2Q8N394 836 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 CTCFLQ8NI51 663 aaPredicted RBP20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 SPZ1Q9BXG8 430 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 VTA1Q9NP79 307 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 GNEQ9Y223 722 aaKnown RBP20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 SNX14Q9Y5W7 946 aa20.46■□□□□ 0.87
HLA-DPB1-215ENST00000478189 REC8O95072 547 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SMPD1P17405 629 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 HSD17B4P51659 736 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 ATN1P54259 1190 aaPredicted RBP20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 GJA9P57773 515 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 MCF2L2Q86YR7 1114 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 RAB11FIP4Q86YS3 637 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PRO3102Q9H379 93 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PCDH10Q9P2E7 1040 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PCDHA1Q9Y5I3 950 aa20.45■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PNMA6FA0A0J9YX94 578 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CPA1P15085 419 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 KIF5BP33176 963 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TNFAIP2Q03169 654 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 APOA5Q6Q788 366 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SLC39A5Q6ZMH5 540 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SRBD1Q8N5C6 995 aaKnown RBP20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 FERMT2Q96AC1 680 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TAAR1Q96RJ0 339 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 BRPF3Q9ULD4 1205 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SLC12A7Q9Y666 1083 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 LAMA3Q16787 3333 aa20.44■□□□□ 0.86
HLA-DPB1-215ENST00000478189 A0A1W2PQ45 241 aaPredicted RBP20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 A0A1W2PQY0 241 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 RBM47A0AV96 593 aaKnown RBP20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CALM1P0DP23 149 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CALM2P0DP24 149 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CALM3P0DP25 149 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 ACLYP53396 1101 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 RTP1P59025 263 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 MICU3Q86XE3 530 aa20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TSEN34Q9BSV6 310 aaKnown RBP20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 ZMYND8Q9ULU4 1186 aaPredicted RBP20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 COLQQ9Y215 455 aaPredicted RBP20.43■□□□□ 0.86
HLA-DPB1-215ENST00000478189 EPB41L2O43491 1005 aaKnown RBP20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 C6orf222P0C671 652 aaPredicted RBP20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 KCNA10Q16322 511 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 C1orf53Q5VUE5 145 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 IQSEC1Q6DN90 963 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CHRDL2Q6WN34 429 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TMTC3Q6ZXV5 915 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TLK2Q86UE8 772 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CMTR1Q8N1G2 835 aaKnown RBP20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 LZTS2Q9BRK4 669 aa20.42■□□□□ 0.86
HLA-DPB1-215ENST00000478189 MOXD2PA6NHM9 499 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CFBP00751 764 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 HMGB1P09429 215 aaKnown RBP20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 SYN1P17600 705 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PDE4DQ08499 809 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 TRIM60Q495X7 471 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 FANCBQ8NB91 859 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PIBF1Q8WXW3 757 aa20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
HLA-DPB1-215ENST00000478189 GNAQP50148 359 aa20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 BEX3Q00994 111 aa20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 DUSP28Q4G0W2 176 aa20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 NSUN6Q8TEA1 469 aaKnown RBP20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 RMDN3Q96TC7 470 aa20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 PXMP2Q9NR77 195 aa20.4■□□□□ 0.86
HLA-DPB1-215ENST00000478189 CNTNAP5Q8WYK1 1306 aa20.39■□□□□ 0.85
HLA-DPB1-215ENST00000478189 ASGR1P07306 291 aa20.39■□□□□ 0.85
HLA-DPB1-215ENST00000478189 HOXA13P31271 388 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms