RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 SLC27A2O14975 620 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 DUSP11O75319 330 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 SMPD1P17405 629 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 ITGB8P26012 769 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 MCM5P33992 734 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 ALDH5A1P51649 535 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 TLE2Q04725 743 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 TRAF1Q13077 416 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 KRT32Q14532 448 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 WTAPQ15007 396 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 CREB3L3Q68CJ9 461 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 PPP4R3CPQ6ZMV5 832 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 RNF180Q86T96 592 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 MYL10Q9BUA6 226 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 PRDM5Q9NQX1 630 aaPredicted RBP16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 PDLIM7Q9NR12 457 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 COL20A1Q9P218 1284 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 MAD2L2Q9UI95 211 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 LCTP09848 1927 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
SOX2-OT-208ENST00000477928 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.17
SOX2-OT-208ENST00000477928 ASB14A6NK59 587 aa16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 PQBP1O60828 265 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 LIFRP42702 1097 aa16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 RNF207Q6ZRF8 634 aa16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 NOL8Q76FK4 1167 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 UPF3AQ9H1J1 476 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-208ENST00000477928 PALM3A6NDB9 673 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 KLRF2D3W0D1 207 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 OPLAHO14841 1288 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 REC8O95072 547 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 GJA9P57773 515 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 TNFAIP2Q03169 654 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 RAB11FIP4Q86YS3 637 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 SAMD3Q8N6K7 520 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 UBE2OQ9C0C9 1292 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 MYH6P13533 1939 aa16.07■□□□□ 0.16
SOX2-OT-208ENST00000477928 ABCB11O95342 1321 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 EIF5BO60841 1220 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 DDAH1O94760 285 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 ASGR1P07306 291 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 HMGB1P09429 215 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 CALM1P0DP23 149 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 CALM2P0DP24 149 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 CALM3P0DP25 149 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 CST5P28325 142 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 SMARCA1P28370 1054 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 BMP8BP34820 402 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 TROAPQ12815 778 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 GRM4Q14833 912 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 TMEM67Q5HYA8 995 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 GNASQ5JWF2 1037 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 TLK2Q86UE8 772 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 COPS5Q92905 334 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 MPHOSPH6Q99547 160 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 MCM3APO60318 1980 aa16.06■□□□□ 0.16
SOX2-OT-208ENST00000477928 B4DLN1 442 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 DYNC1LI2O43237 492 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 CYTH3O43739 400 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 KIF5BP33176 963 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 MRPL12P52815 198 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 CXCL17Q6UXB2 119 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 FBXO11Q86XK2 927 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 MCF2L2Q86YR7 1114 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 SYTL5Q8TDW5 730 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 BADQ92934 168 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 KCNB2Q92953 911 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 MTMR8Q96EF0 704 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 TAAR1Q96RJ0 339 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 PIGSQ96S52 555 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 LZTS2Q9BRK4 669 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 MAP3K20Q9NYL2 800 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-208ENST00000477928 PRC1O43663 620 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 ARIH2O95376 493 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 RXRAP19793 462 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 EDNRBP24530 442 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 GNAQP50148 359 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 EPHB4P54760 987 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 C1orf53Q5VUE5 145 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 DNERQ8NFT8 737 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 RIOX1Q9H6W3 641 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 VTA1Q9NP79 307 aa16.04■□□□□ 0.16
SOX2-OT-208ENST00000477928 MRPL11Q9Y3B7 192 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms