RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 MAD2L2Q9UI95 211 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 LCTP09848 1927 aa16.45■□□□□ 0.22
PDE6D-204ENST00000477748 ASB14A6NK59 587 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 RNF207Q6ZRF8 634 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 KLHDC9Q8NEP7 349 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 TMEM87BQ96K49 555 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 PURBQ96QR8 312 aaKnown RBP16.44■□□□□ 0.22
PDE6D-204ENST00000477748 LY9Q9HBG7 655 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
PDE6D-204ENST00000477748 ABCB11O95342 1321 aa16.44■□□□□ 0.22
PDE6D-204ENST00000477748 BAZ2BQ9UIF8 2168 aaKnown RBP16.43■□□□□ 0.22
PDE6D-204ENST00000477748 CLTBP09497 229 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 CALML3P27482 149 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 ACLYP53396 1101 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 TLE2Q04725 743 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 TROAPQ12815 778 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 FBXO11Q86XK2 927 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 PCSK9Q8NBP7 692 aaKnown RBP16.43■□□□□ 0.22
PDE6D-204ENST00000477748 NEK1Q96PY6 1258 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
PDE6D-204ENST00000477748 STARD7Q9NQZ5 370 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 ADD3Q9UEY8 706 aaKnown RBP16.43■□□□□ 0.22
PDE6D-204ENST00000477748 ASTN1O14525 1302 aa16.43■□□□□ 0.22
PDE6D-204ENST00000477748 LTBP2Q14767 1821 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 CCDC69A6NI79 296 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
PDE6D-204ENST00000477748 GJA9P57773 515 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 RPS6P62753 249 aaKnown RBP16.42■□□□□ 0.22
PDE6D-204ENST00000477748 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
PDE6D-204ENST00000477748 CCSAPQ6IQ19 270 aaPredicted RBP16.42■□□□□ 0.22
PDE6D-204ENST00000477748 SLC30A10Q6XR72 485 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 TOX2Q96NM4 488 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 MYL10Q9BUA6 226 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 KATNBL1Q9H079 304 aa16.42■□□□□ 0.22
PDE6D-204ENST00000477748 PQBP1O60828 265 aaKnown RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 DDAH1O94760 285 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 REC8O95072 547 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 LIFRP42702 1097 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 ALDH5A1P51649 535 aaPredicted RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 KRT32Q14532 448 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 KCNA10Q16322 511 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 HOMER1Q86YM7 354 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 DEFB123Q8N688 67 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 MTMR8Q96EF0 704 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 GLT1D1Q96MS3 346 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 AMNQ9BXJ7 453 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 MRPL11Q9Y3B7 192 aaKnown RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 DDX49Q9Y6V7 483 aaKnown RBP16.41■□□□□ 0.22
PDE6D-204ENST00000477748 ELP1O95163 1332 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
PDE6D-204ENST00000477748 LOC102724159A0A0B4J2E5 919 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 TRIM43BA6NCK2 446 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 ZBTB5O15062 677 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 KIAA0355O15063 1070 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 KIF5BP33176 963 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 NKX3-2P78367 333 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 PWP2Q15269 919 aaKnown RBP16.4■□□□□ 0.22
PDE6D-204ENST00000477748 ADCK5Q3MIX3 580 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 EEPD1Q7L9B9 569 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 MCF2L2Q86YR7 1114 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 RGS22Q8NE09 1264 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 BADQ92934 168 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 TRIM43Q96BQ3 446 aaPredicted RBP16.4■□□□□ 0.22
PDE6D-204ENST00000477748 PIGSQ96S52 555 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 MAP3K14Q99558 947 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 RIOX1Q9H6W3 641 aa16.4■□□□□ 0.22
PDE6D-204ENST00000477748 LRRC37A2A6NM11 1700 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 MYADML2A6NDP7 307 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 DCDC2CA8MYV0 355 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 ADCY6O43306 1168 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 CALM1P0DP23 149 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 CALM2P0DP24 149 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 CALM3P0DP25 149 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 HSPA4P34932 840 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 SLC35G1Q2M3R5 365 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 DHX32Q7L7V1 743 aaKnown RBP16.39■□□□□ 0.21
PDE6D-204ENST00000477748 SH3RF1Q7Z6J0 888 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
PDE6D-204ENST00000477748 MORC4Q8TE76 937 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 TBC1D5Q92609 795 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 TCEANC2Q96MN5 208 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
PDE6D-204ENST00000477748 MAF1Q9H063 256 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 VTA1Q9NP79 307 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 SLC12A7Q9Y666 1083 aa16.39■□□□□ 0.21
PDE6D-204ENST00000477748 A0A0U1RQG5 324 aaPredicted RBP16.38■□□□□ 0.21
PDE6D-204ENST00000477748 B4DLN1 442 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 CYTH3O43739 400 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 PPP1R11O60927 126 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms