RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 MAPK8IP1Q9UQF2 711 aa14.02□□□□□ -0.17
RTFDC1-207ENST00000477573 C4BP0C0L5 1744 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 KIF5CO60282 957 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 IDH1O75874 414 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 GHRP10912 638 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 PDE6BP35913 854 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 LBRQ14739 615 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 SGSM1Q2NKQ1 1148 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 ANKRD20A8PQ5CZ79 823 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 CCDC83Q8IWF9 413 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 KCNN1Q92952 543 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 PPP1R14BQ96C90 147 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 PGBD1Q96JS3 809 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 MPHOSPH6Q99547 160 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 FRMD4BQ9Y2L6 1034 aa14.01□□□□□ -0.17
RTFDC1-207ENST00000477573 FAM107AO95990 144 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 PARP1P09874 1014 aaKnown RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 MAP3K12Q12852 859 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 IMMTQ16891 758 aaKnown RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 INF2Q27J81 1249 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 SPECC1Q5M775 1068 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 GET4Q7L5D6 327 aaPredicted RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 RIN2Q8WYP3 895 aaPredicted RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 OPTNQ96CV9 577 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 GNL3Q9BVP2 549 aaKnown RBP eCLIP14□□□□□ -0.17
RTFDC1-207ENST00000477573 TAF6LQ9Y6J9 622 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 COL24A1Q17RW2 1714 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 GPAA1O43292 621 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 TRPC1P48995 793 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 CCNG1P51959 295 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 ELF3P78545 371 aaPredicted RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 MRPS35P82673 323 aaKnown RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 UBE4AQ14139 1066 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 SLC27A3Q5K4L6 730 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 DHX32Q7L7V1 743 aaKnown RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 CXorf38Q8TB03 319 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 MAIP1Q8WWC4 291 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 L3MBTL3Q96JM7 780 aaPredicted RBP14□□□□□ -0.17
RTFDC1-207ENST00000477573 IWS1Q96ST2 819 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 MTRQ99707 1265 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 BRD8Q9H0E9 1235 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 MYH15Q9Y2K3 1946 aa14□□□□□ -0.17
RTFDC1-207ENST00000477573 CTAGE9A4FU28 777 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 LARGE1O95461 756 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 ZFXP17010 805 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 KIF5BP33176 963 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 LSP1P33241 339 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 USP14P54578 494 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 PKN1Q16512 942 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 C16orf87Q6PH81 154 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 KRT27Q7Z3Y8 459 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 ARL10Q8N8L6 244 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 DHRS1Q96LJ7 313 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 OSBPL1AQ9BXW6 950 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 PUS7LQ9H0K6 701 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 PIH1D3Q9NQM4 214 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 TOB2Q14106 344 aaPredicted RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 ATP11CQ8NB49 1132 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 GALNT8Q9NY28 637 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 TFIP11Q9UBB9 837 aaKnown RBP13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
RTFDC1-207ENST00000477573 A0A1B0GVG6 124 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 E7EWF7 191 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 IKBKBO14920 756 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 MBD4O95243 580 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CCDC175P0C221 793 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 PDE6AP16499 860 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 SCTRP47872 440 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 PSMD7P51665 324 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 MXRA7P84157 204 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 RASGRF1Q13972 1273 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 Q6ZUG5 572 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 SMIM5Q71RC9 77 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 NLRP14Q86W24 1093 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CCDC155Q8N6L0 562 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 MYCBPAPQ8TBZ2 947 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 RUBCNQ92622 972 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CCT8L2Q96SF2 557 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CORO1BQ9BR76 489 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 UBE2OQ9C0C9 1292 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 RABEP2Q9H5N1 569 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 AATFQ9NY61 560 aaKnown RBP eCLIP13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CIDEBQ9UHD4 219 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CARMIL3Q8ND23 1372 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CCDC166P0CW27 439 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 IDO1P14902 403 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 RPS8P62241 208 aaKnown RBP13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 FANCCQ00597 558 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 PTGISQ16647 500 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 CAVIN4Q5BKX8 364 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 EHBP1Q8NDI1 1231 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 RPGRIP1Q96KN7 1286 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 TCEANC2Q96MN5 208 aa13.98□□□□□ -0.17
RTFDC1-207ENST00000477573 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms