RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 LRRC37A2A6NM11 1700 aa18.57■□□□□ 0.56
VHL-203ENST00000477538 GCOM1H8Y6P7 765 aaPredicted RBP18.56■□□□□ 0.56
VHL-203ENST00000477538 MEIS2O14770 477 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 POLR2MP0CAP2 368 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 DDIT3P35638 169 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 HSD17B4P51659 736 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 GHRHRQ02643 423 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 UBE2SQ16763 222 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 USP17L6PQ6QN14 398 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 RNF207Q6ZRF8 634 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
VHL-203ENST00000477538 REXO1Q8N1G1 1221 aaKnown RBP18.56■□□□□ 0.56
VHL-203ENST00000477538 MMP19Q99542 508 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 MAF1Q9H063 256 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 A1CFQ9NQ94 594 aaKnown RBP18.56■□□□□ 0.56
VHL-203ENST00000477538 WBP1LQ9NX94 342 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 IVNS1ABPQ9Y6Y0 642 aa18.56■□□□□ 0.56
VHL-203ENST00000477538 PFASO15067 1338 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 PIK3CDO00329 1044 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 ADAMTS3O15072 1205 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 ECM2O94769 699 aaPredicted RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 FCER1AP12319 257 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 HOXA13P31271 388 aaPredicted RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 RPS6P62753 249 aaKnown RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 SP3Q02447 781 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 BAATQ14032 418 aaPredicted RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 SLC30A10Q6XR72 485 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 GPR142Q7Z601 462 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 PLEKHH3Q7Z736 793 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 ANKRD35Q8N283 1001 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 OXER1Q8TDS5 423 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 MAP3K20Q9NYL2 800 aaKnown RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 CYP39A1Q9NYL5 469 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 BIN2Q9UBW5 565 aaPredicted RBP18.55■□□□□ 0.56
VHL-203ENST00000477538 MTMR6Q9Y217 621 aa18.55■□□□□ 0.56
VHL-203ENST00000477538 BTBD18B2RXH4 712 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 M0R2N6 131 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 GPR25O00155 361 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 CLK2P49760 499 aaKnown RBP18.54■□□□□ 0.56
VHL-203ENST00000477538 LACTBP83111 547 aaPredicted RBP18.54■□□□□ 0.56
VHL-203ENST00000477538 GNL2Q13823 731 aaKnown RBP18.54■□□□□ 0.56
VHL-203ENST00000477538 PKP1Q13835 747 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 KCTD2Q14681 263 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 JAKMIP3Q5VZ66 844 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 RASGRP4Q8TDF6 673 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 TMEM260Q9NX78 707 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 PCDHA6Q9UN73 950 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 PCDHA8Q9Y5H6 950 aa18.54■□□□□ 0.56
VHL-203ENST00000477538 STRNO43815 780 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 NR5A1Q13285 461 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 AP3B2Q13367 1082 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 FCHSD1Q86WN1 690 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 ABRAQ8N0Z2 381 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 FOXP1Q9H334 677 aaPredicted RBP18.53■□□□□ 0.56
VHL-203ENST00000477538 TSKSQ9UJT2 592 aa18.53■□□□□ 0.56
VHL-203ENST00000477538 SPDYE3A6NKU9 549 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 KIF28PB7ZC32 967 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 TNPO2O14787 897 aaKnown RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 FOSP01100 380 aaPredicted RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 ZSCAN22P10073 491 aaPredicted RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 PTPREP23469 700 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 FCGRTP55899 365 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 GRB14Q14449 540 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 KIF22Q14807 665 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 NOM1Q5C9Z4 860 aaKnown RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 MCTP2Q6DN12 878 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 JMYQ8N9B5 988 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 SYTL5Q8TDW5 730 aaPredicted RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 TNFRSF25Q93038 417 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 COL20A1Q9P218 1284 aa18.52■□□□□ 0.56
VHL-203ENST00000477538 CIZ1Q9ULV3 898 aaPredicted RBP18.52■□□□□ 0.56
VHL-203ENST00000477538 CCDC194A0A1B0GVG4 234 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 SLC15A5A6NIM6 579 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 POTEB2H3BUK9 544 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 FKTNO75072 461 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.55
VHL-203ENST00000477538 ADORA2AP29274 412 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 CTGFP29279 349 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 PSMC4P43686 418 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 FOXD4L5Q5VV16 416 aaPredicted RBP18.51■□□□□ 0.55
VHL-203ENST00000477538 KRT25Q7Z3Z0 450 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 FERMT3Q86UX7 667 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 FOXD4L4Q8WXT5 416 aaPredicted RBP18.51■□□□□ 0.55
VHL-203ENST00000477538 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 ANO3Q9BYT9 981 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 ARHGAP39Q9C0H5 1083 aa18.51■□□□□ 0.55
VHL-203ENST00000477538 DOCK5Q9H7D0 1870 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 DNAJC25-GNG10A0A024R161 153 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 BRD1O95696 1058 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 PGK2P07205 417 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 NUCB2P80303 420 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 CNTN2Q02246 1040 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 RESTQ13127 1097 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 PIK3AP1Q6ZUJ8 805 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 NOSTRINQ8IVI9 506 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 FAM133AQ8N9E0 248 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 CD99L2Q8TCZ2 262 aa18.5■□□□□ 0.55
VHL-203ENST00000477538 TAAR1Q96RJ0 339 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms