RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 NCBP1Q09161 790 aaKnown RBP16.17■□□□□ 0.18
HDAC6-220ENST00000477528 UTP14CQ5TAP6 766 aaKnown RBP16.17■□□□□ 0.18
HDAC6-220ENST00000477528 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-220ENST00000477528 IMPG2Q9BZV3 1241 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 HYOU1Q9Y4L1 999 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
HDAC6-220ENST00000477528 NPR1P16066 1061 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 FBXO33Q7Z6M2 555 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 ACRBPQ8NEB7 543 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 METTL14Q9HCE5 456 aaKnown RBP16.17■□□□□ 0.18
HDAC6-220ENST00000477528 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
HDAC6-220ENST00000477528 BACH1O14867 736 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 ATP8B1O43520 1251 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 CTNNA2P26232 953 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 ZBED6P86452 979 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 PSMD2Q13200 908 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 SEPT2Q15019 361 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 RPS6KA1Q15418 735 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
HDAC6-220ENST00000477528 FKBP3Q00688 224 aaKnown RBP16.16■□□□□ 0.18
HDAC6-220ENST00000477528 RNF187Q5TA31 235 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-220ENST00000477528 CPXCR1Q8N123 301 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 ARFGAP2Q8N6H7 521 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 AFAP1L1Q8TED9 768 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 NFAT5O94916 1531 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 DKC1O60832 514 aaKnown RBP eCLIP16.16■□□□□ 0.183e-10■■■■■ 48.8
HDAC6-220ENST00000477528 ORC2Q13416 577 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-220ENST00000477528 MB21D1Q8N884 522 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 DNAI2Q9GZS0 605 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 POLR2FP61218 127 aaKnown RBP16.16■□□□□ 0.18
HDAC6-220ENST00000477528 NFIXQ14938 502 aa16.16■□□□□ 0.18
HDAC6-220ENST00000477528 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.16■□□□□ 0.181e-7■■■■■ 50.5
HDAC6-220ENST00000477528 USP17L5A8MUK1 530 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 POLD1P28340 1107 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 KCNJ6P48051 423 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 KRT27Q7Z3Y8 459 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 CCDC170Q8IYT3 715 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 SYCE1Q8N0S2 351 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 NEDD1Q8NHV4 660 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 TCHPQ9BT92 498 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 NDUFA10O95299 355 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 RNASE9P60153 205 aaKnown RBP16.15■□□□□ 0.18
HDAC6-220ENST00000477528 CCZ1BP86790 482 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-220ENST00000477528 MAP2K1Q02750 393 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-220ENST00000477528 CEP95Q96GE4 821 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 SPATA31A5Q5VU36 1347 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 SPATA31A7Q8IWB4 1347 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 TCP10L2B9ZVM9 353 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 ZBED4O75132 1171 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-220ENST00000477528 SEMA3FQ13275 785 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 GBP6Q6ZN66 633 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 MTUS1Q9ULD2 1270 aa16.15■□□□□ 0.18
HDAC6-220ENST00000477528 CEP104O60308 925 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 GPSM2P81274 684 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 TOGARAM2Q6ZUX3 1019 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 GOLGA6BA6NDN3 693 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 BCRP11274 1271 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 SP4Q02446 784 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 LRRC41Q15345 812 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 UBE2SQ16763 222 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 ELOA2Q8IYF1 753 aaPredicted RBP16.14■□□□□ 0.17
HDAC6-220ENST00000477528 KIFAP3Q92845 792 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 FAM184BQ9ULE4 1060 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 PRCPP42785 496 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 LRRC63Q05C16 580 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 PAK2Q13177 524 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 VPS72Q15906 364 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 DPF2Q92785 391 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 RABGAP1Q9Y3P9 1069 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 SEL1L2Q5TEA6 688 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 MIER3Q7Z3K6 550 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 GOLGA5Q8TBA6 731 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 CSRNP1Q96S65 589 aa16.14■□□□□ 0.17
HDAC6-220ENST00000477528 STAT1P42224 750 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 STAG2Q8N3U4 1231 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 DDX12PQ92771 950 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 LGALS16A8MUM7 142 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 PTPAQ15257 358 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 SND1Q7KZF4 910 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDAC6-220ENST00000477528 PEX26Q7Z412 305 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 MTRF1LQ9UGC7 380 aaKnown RBP16.13■□□□□ 0.17
HDAC6-220ENST00000477528 BMP3P12645 472 aa16.13■□□□□ 0.17
HDAC6-220ENST00000477528 PABPC4Q13310 644 aaKnown RBP eCLIP16.13■□□□□ 0.172e-6■■■■□ 25.6
HDAC6-220ENST00000477528 PPP1R18Q6NYC8 613 aa16.12■□□□□ 0.17
HDAC6-220ENST00000477528 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
HDAC6-220ENST00000477528 UNC13DQ70J99 1090 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms