RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 ERMP1Q7Z2K6 904 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 DEFB128Q7Z7B8 93 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 CHST13Q8NET6 341 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-204ENST00000477429 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 RNF146Q9NTX7 359 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 ARPP21Q9UBL0 812 aaPredicted RBP11.68□□□□□ -0.54
COL4A5-204ENST00000477429 PCDHA11Q9Y5I1 949 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 SLC4A7Q9Y6M7 1214 aa11.68□□□□□ -0.54
COL4A5-204ENST00000477429 ACACBO00763 2458 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 ERC2O15083 957 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 LPXNO60711 386 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 TAP1Q03518 808 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 HSP90AB4PQ58FF6 505 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 SLFN13Q68D06 897 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL4A5-204ENST00000477429 MKNK2Q9HBH9 465 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 ZBTB40Q9NUA8 1239 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 FEM1BQ9UK73 627 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 BRWD1Q9NSI6 2320 aa11.67□□□□□ -0.54
COL4A5-204ENST00000477429 MYH7P12883 1935 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 MYH4Q9Y623 1939 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 FOXP2O15409 715 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 NMT2O60551 498 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 POU3F3P20264 500 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-204ENST00000477429 OAZ1P54368 228 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 GPNMBQ14956 572 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 SKIV2LQ15477 1246 aaKnown RBP11.66□□□□□ -0.54
COL4A5-204ENST00000477429 TPRNQ4KMQ1 711 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 KCTD1Q719H9 257 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 SEC62Q99442 399 aaKnown RBP11.66□□□□□ -0.54
COL4A5-204ENST00000477429 KCNH6Q9H252 994 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 ACAD9Q9H845 621 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 CYP39A1Q9NYL5 469 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 FBXO40Q9UH90 709 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 COG6Q9Y2V7 657 aa11.66□□□□□ -0.54
COL4A5-204ENST00000477429 TET1Q8NFU7 2136 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 TRIOO75962 3097 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 PTPRSQ13332 1948 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 GPAA1O43292 621 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 BMP3P12645 472 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 ALAS1P13196 640 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 MCCP23508 829 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
COL4A5-204ENST00000477429 C1QBPQ07021 282 aaKnown RBP11.65□□□□□ -0.54
COL4A5-204ENST00000477429 GRB10Q13322 594 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 RPAP2Q8IXW5 612 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-204ENST00000477429 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 MORC4Q8TE76 937 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 COPS5Q92905 334 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 TRERF1Q96PN7 1200 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 CTAGE1Q96RT6 745 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 IL17RBQ9NRM6 502 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 CTDP1Q9Y5B0 961 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-204ENST00000477429 RIF1Q5UIP0 2472 aaKnown RBP11.65□□□□□ -0.54
COL4A5-204ENST00000477429 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
COL4A5-204ENST00000477429 TNKSO95271 1327 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 GFRA3O60609 400 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 RAB11FIP3O75154 756 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 CABYRO75952 493 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 TTLL1O95922 423 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 TMEM67Q5HYA8 995 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 NEDD1Q8NHV4 660 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 DDRGK1Q96HY6 314 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 AP5M1Q9H0R1 490 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 PRR12Q9ULL5 1215 aa11.64□□□□□ -0.55
COL4A5-204ENST00000477429 GPR179Q6PRD1 2367 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 COL4A4P53420 1690 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 MED19A0JLT2 244 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 NFIBO00712 420 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 MYL3P08590 195 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 SLC16A2P36021 539 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 STAT2P52630 851 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 TFAP4Q01664 338 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 GIMAP6Q6P9H5 292 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 NSMFQ6X4W1 530 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 HERC6Q8IVU3 1022 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 RPUSD2Q8IZ73 545 aaKnown RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 KBTBD3Q8NAB2 608 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 STAG1Q8WVM7 1258 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 MTIF3Q9H2K0 278 aaKnown RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 RALYQ9UKM9 306 aaKnown RBP11.63□□□□□ -0.55
COL4A5-204ENST00000477429 PLIN4Q96Q06 1357 aa11.63□□□□□ -0.55
COL4A5-204ENST00000477429 ASB14A6NK59 587 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 IQCF3P0C7M6 154 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 BAATQ14032 418 aaPredicted RBP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 DUSP28Q4G0W2 176 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms