RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
LSM2-212ENST00000477182 ATG4CQ96DT6 458 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 SEZ6LQ9BYH1 1024 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 KRT23Q9C075 422 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
LSM2-212ENST00000477182 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 MYADML2A6NDP7 307 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 ZBBXA8MT70 800 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 RFXAPO00287 272 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 TMEM132BQ14DG7 1078 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 GNASQ5JWF2 1037 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 CYB5R4Q7L1T6 521 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 RIOX2Q8IUF8 465 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 ZNF444Q8N0Y2 327 aaPredicted RBP13.51□□□□□ -0.25
LSM2-212ENST00000477182 ESR2Q92731 530 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
LSM2-212ENST00000477182 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
LSM2-212ENST00000477182 CYP46A1Q9Y6A2 500 aa13.51□□□□□ -0.25
LSM2-212ENST00000477182 COL11A1P12107 1806 aaPredicted RBP13.5□□□□□ -0.25
LSM2-212ENST00000477182 TSPY2A6NKD2 308 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 MPHOSPH10O00566 681 aaKnown RBP13.5□□□□□ -0.25
LSM2-212ENST00000477182 CA3P07451 260 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 PFKMP08237 780 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 AKR1B1P15121 316 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 GJA9P57773 515 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 ANTXR2P58335 489 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 TFAP4Q01664 338 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 MAMDC4Q6UXC1 1216 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 GJD3Q8N144 294 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 FBXL18Q96ME1 805 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
LSM2-212ENST00000477182 ZSWIM6Q9HCJ5 1215 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 CD320Q9NPF0 282 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 ZSWIM5Q9P217 1185 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 PARP14Q460N5 1801 aa13.5□□□□□ -0.25
LSM2-212ENST00000477182 PRC1O43663 620 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 CABYRO75952 493 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
LSM2-212ENST00000477182 TSPY3P0CV98 308 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 TSPY8P0CW00 308 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 MCM5P33992 734 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 STAT3P40763 770 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 CCL23P55773 120 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 RABEP1Q15276 862 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
LSM2-212ENST00000477182 RUFY3Q7L099 469 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
LSM2-212ENST00000477182 ZKSCAN3Q9BRR0 538 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 ARHGEF10LQ9HCE6 1279 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 TSHZ2Q9NRE2 1034 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 ADAMTS5Q9UNA0 930 aa13.49□□□□□ -0.25
LSM2-212ENST00000477182 WDR46O15213 610 aaKnown RBP13.48□□□□□ -0.25
LSM2-212ENST00000477182 NMT2O60551 498 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 SNAI1O95863 264 aaPredicted RBP13.48□□□□□ -0.25
LSM2-212ENST00000477182 NEK4P51957 841 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
LSM2-212ENST00000477182 ACVR2BQ13705 512 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 KRT40Q6A162 431 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 TMEM179Q6ZVK1 233 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 ZNF467Q7Z7K2 595 aaPredicted RBP13.48□□□□□ -0.25
LSM2-212ENST00000477182 FAM178BQ8IXR5 827 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 NEDD1Q8NHV4 660 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 ARNTL2Q8WYA1 636 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 CCDC17Q96LX7 622 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 NOC4LQ9BVI4 516 aaKnown RBP13.48□□□□□ -0.25
LSM2-212ENST00000477182 ABHD16BQ9H3Z7 469 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 CERS4Q9HA82 394 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
LSM2-212ENST00000477182 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 WDFY4Q6ZS81 3184 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 UMODL1Q5DID0 1318 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 WDR19Q8NEZ3 1342 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 KIF28PB7ZC32 967 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 ACTN1P12814 892 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 SSTR3P32745 418 aaPredicted RBP13.47□□□□□ -0.25
LSM2-212ENST00000477182 NT5C2P49902 561 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 NKX3-2P78367 333 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 KIAA1755Q5JYT7 1200 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 IQCA1Q86XH1 822 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 PHOSPHO2Q8TCD6 241 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 SLC9A7Q96T83 725 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 UBAC1Q9BSL1 405 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.47□□□□□ -0.25
LSM2-212ENST00000477182 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 GPHNQ9NQX3 736 aaPredicted RBP13.47□□□□□ -0.25
LSM2-212ENST00000477182 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 BRWD1Q9NSI6 2320 aa13.47□□□□□ -0.25
LSM2-212ENST00000477182 EPOPA6NHQ4 379 aa13.46□□□□□ -0.25
LSM2-212ENST00000477182 IFIT3O14879 490 aaKnown RBP13.46□□□□□ -0.25
LSM2-212ENST00000477182 FOXK2Q01167 660 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms