RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 ADAMTSL1Q8N6G6 1762 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 PES1O00541 588 aaKnown RBP23.56■■□□□ 1.36
LIMS2-214ENST00000476932 ADRA2BP18089 450 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 KLK7P49862 253 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 GRB10Q13322 594 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 COBLL1Q53SF7 1204 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 MIIPQ5JXC2 388 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 DAGLAQ9Y4D2 1042 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 FRMPD2Q68DX3 1309 aaPredicted RBP23.56■■□□□ 1.36
LIMS2-214ENST00000476932 BICDL2A1A5D9 508 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 WHAMMP3Q1A5X7 153 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 LONRF2Q1L5Z9 754 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 HPS3Q969F9 1004 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 BLOC1S4Q9NUP1 217 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 AGPAT5Q9NUQ2 364 aa23.56■■□□□ 1.36
LIMS2-214ENST00000476932 GREB1LQ9C091 1923 aaPredicted RBP23.55■■□□□ 1.36
LIMS2-214ENST00000476932 GABPAQ06546 454 aa23.55■■□□□ 1.36
LIMS2-214ENST00000476932 MYH7BA7E2Y1 1941 aa23.55■■□□□ 1.36
LIMS2-214ENST00000476932 SERPINB2P05120 415 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 ZSCAN29Q8IWY8 852 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-214ENST00000476932 TBC1D22AQ8WUA7 517 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 RBM17Q96I25 401 aaKnown RBP23.54■■□□□ 1.36
LIMS2-214ENST00000476932 PNMA5Q96PV4 448 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 MTMR4Q9NYA4 1195 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 TFR2Q9UP52 801 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 IGKV6D-41A0A0C4DH26 115 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 hCG_1984214I3L0E3 225 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 SLC37A4O43826 429 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 SNHG28P0DPA3 235 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 SLF2Q8IX21 1173 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 ZNF713Q8N859 430 aaPredicted RBP23.54■■□□□ 1.36
LIMS2-214ENST00000476932 CCDC47Q96A33 483 aaKnown RBP23.54■■□□□ 1.36
LIMS2-214ENST00000476932 SEMA6BQ9H3T3 888 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 GUCA1BQ9UMX6 200 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 MYH4Q9Y623 1939 aa23.54■■□□□ 1.36
LIMS2-214ENST00000476932 PSMD14O00487 310 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 ST5P78524 1137 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 LRRC47Q8N1G4 583 aaKnown RBP23.53■■□□□ 1.36
LIMS2-214ENST00000476932 HNRNPLLQ8WVV9 542 aaKnown RBP23.53■■□□□ 1.36
LIMS2-214ENST00000476932 COA7Q96BR5 231 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 HAUS4Q9H6D7 363 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 MAP2K7O14733 419 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 HOXA10P31260 410 aaPredicted RBP23.53■■□□□ 1.36
LIMS2-214ENST00000476932 PPP1R2P41236 205 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 TXKP42681 527 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 FXR2P51116 673 aaKnown RBP eCLIP23.53■■□□□ 1.36
LIMS2-214ENST00000476932 CLEC10AQ8IUN9 316 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 MYO6Q9UM54 1294 aa23.53■■□□□ 1.36
LIMS2-214ENST00000476932 TDP2O95551 362 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 AKR1B1P15121 316 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 AMPD3Q01432 767 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 TBC1D8BQ0IIM8 1120 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 BEND6Q5SZJ8 279 aaPredicted RBP23.52■■□□□ 1.36
LIMS2-214ENST00000476932 ZNF662Q6ZS27 426 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 TRAPPC11Q7Z392 1133 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 RETREG2Q8NC44 543 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 CALML4Q96GE6 196 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 ANKRD31Q8N7Z5 1873 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 MYMKA6NI61 221 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 POTEB2H3BUK9 544 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 BBOX1O75936 387 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 OAS2P29728 719 aaKnown RBP23.52■■□□□ 1.36
LIMS2-214ENST00000476932 SMC1AQ14683 1233 aaKnown RBP23.52■■□□□ 1.36
LIMS2-214ENST00000476932 CALCRLQ16602 461 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 ASPRV1Q53RT3 343 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 CNNM4Q6P4Q7 775 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 FAM114A1Q8IWE2 563 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 ERGIC2Q96RQ1 377 aa23.52■■□□□ 1.36
LIMS2-214ENST00000476932 TRIM21P19474 475 aaKnown RBP23.51■■□□□ 1.35
LIMS2-214ENST00000476932 NCAPH2Q6IBW4 605 aa23.51■■□□□ 1.35
LIMS2-214ENST00000476932 CENPPQ6IPU0 288 aa23.51■■□□□ 1.35
LIMS2-214ENST00000476932 NOA1Q8NC60 698 aaKnown RBP23.51■■□□□ 1.35
LIMS2-214ENST00000476932 NUP58Q9BVL2 599 aa23.51■■□□□ 1.35
LIMS2-214ENST00000476932 STK17AQ9UEE5 414 aa23.51■■□□□ 1.35
LIMS2-214ENST00000476932 C10orf71Q711Q0 1435 aa23.51■■□□□ 1.35
LIMS2-214ENST00000476932 CTAGE15A4D2H0 777 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 CTAGE8P0CG41 777 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 MTIF2P46199 727 aaKnown RBP23.5■■□□□ 1.35
LIMS2-214ENST00000476932 ADCY7P51828 1080 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 TUBB4BP68371 445 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 ZBED6P86452 979 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 DDR1Q08345 913 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 MCM6Q14566 821 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 CTAGE6Q86UF2 777 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 CTAGE4Q8IX94 777 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 SLC39A2Q9NP94 309 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 DDX4Q9NQI0 724 aaKnown RBP23.5■■□□□ 1.35
LIMS2-214ENST00000476932 LRWD1Q9UFC0 647 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 RCCD1A6NED2 376 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 POLR3GO15318 223 aaPredicted RBP23.5■■□□□ 1.35
LIMS2-214ENST00000476932 PICALMQ13492 652 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 FIGNQ5HY92 759 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 SV2BQ7L1I2 683 aa23.5■■□□□ 1.35
LIMS2-214ENST00000476932 NOC4LQ9BVI4 516 aaKnown RBP23.5■■□□□ 1.35
LIMS2-214ENST00000476932 POTEMA6NI47 508 aa23.49■■□□□ 1.35
LIMS2-214ENST00000476932 PPP1R11O60927 126 aaPredicted RBP23.49■■□□□ 1.35
LIMS2-214ENST00000476932 CYP2C19P33261 490 aa23.49■■□□□ 1.35
LIMS2-214ENST00000476932 GTF2IP78347 998 aa23.49■■□□□ 1.35
LIMS2-214ENST00000476932 TSR1Q2NL82 804 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms