RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 STARD7Q9NQZ5 370 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 ZMYND8Q9ULU4 1186 aaPredicted RBP11.87□□□□□ -0.51
CCM2-208ENST00000476594 ATP11BQ9Y2G3 1177 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 Q9Y3F1 56 aa11.87□□□□□ -0.51
CCM2-208ENST00000476594 A0A1W2PQ45 241 aaPredicted RBP11.86□□□□□ -0.51
CCM2-208ENST00000476594 A0A1W2PQY0 241 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 SLC27A2O14975 620 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 NKRFO15226 690 aaKnown RBP eCLIP11.86□□□□□ -0.51
CCM2-208ENST00000476594 PRC1O43663 620 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 ADAMTS4O75173 837 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 CABYRO75952 493 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 HMGB1P09429 215 aaKnown RBP11.86□□□□□ -0.51
CCM2-208ENST00000476594 MORC4Q8TE76 937 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 FERMT2Q96AC1 680 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 SEC63Q9UGP8 760 aaKnown RBP11.86□□□□□ -0.51
CCM2-208ENST00000476594 MAD2L2Q9UI95 211 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 ELP1O95163 1332 aa11.86□□□□□ -0.51
CCM2-208ENST00000476594 PALM3A6NDB9 673 aaPredicted RBP11.85□□□□□ -0.51
CCM2-208ENST00000476594 REC8O95072 547 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 SYN1P17600 705 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 BMP8BP34820 402 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 LIFRP42702 1097 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 ACLYP53396 1101 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 SNX17Q15036 470 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 SLC30A10Q6XR72 485 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 STOX1Q6ZVD7 989 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 TLK2Q86UE8 772 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 FBXO16Q8IX29 292 aaPredicted RBP11.85□□□□□ -0.51
CCM2-208ENST00000476594 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
CCM2-208ENST00000476594 SCFD2Q8WU76 684 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 IWS1Q96ST2 819 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 UPF3AQ9H1J1 476 aaKnown RBP11.85□□□□□ -0.51
CCM2-208ENST00000476594 CPVLQ9H3G5 476 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 SLC12A7Q9Y666 1083 aa11.85□□□□□ -0.51
CCM2-208ENST00000476594 SMCHD1A6NHR9 2005 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 A0A0U1RQG5 324 aaPredicted RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 DCDC2CA8MYV0 355 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 TLR3O15455 904 aaKnown RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 SMARCA1P28370 1054 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 CPT1AP50416 773 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 FGD1P98174 961 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 TROAPQ12815 778 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 KCNA10Q16322 511 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 TRIM60Q495X7 471 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 CHST3Q7LGC8 479 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 KLHDC9Q8NEP7 349 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 IGDCC4Q8TDY8 1250 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 LENG1Q96BZ8 264 aaPredicted RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 NEK1Q96PY6 1258 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 GDF15Q99988 308 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 UBE2OQ9C0C9 1292 aaKnown RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 KATNBL1Q9H079 304 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 RIOX1Q9H6W3 641 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 LY9Q9HBG7 655 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 PRDM5Q9NQX1 630 aaPredicted RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 GPHNQ9NQX3 736 aaPredicted RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 PPP4R2Q9NY27 417 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 RBM27Q9P2N5 1060 aaKnown RBP11.84□□□□□ -0.51
CCM2-208ENST00000476594 PCDHA1Q9Y5I3 950 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 MCM3APO60318 1980 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 MYH6P13533 1939 aa11.84□□□□□ -0.51
CCM2-208ENST00000476594 PNMA6FA0A0J9YX94 578 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 DYNC1LI2O43237 492 aaPredicted RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 EIF5BO60841 1220 aaKnown RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 CFBP00751 764 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 ASGR1P07306 291 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 CLTBP09497 229 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 ANTXR2P58335 489 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 NKX3-2P78367 333 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 TTLL4Q14679 1199 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 STXBP2Q15833 593 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 DUSP28Q4G0W2 176 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 CUL5Q93034 780 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 MTMR8Q96EF0 704 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 TOX2Q96NM4 488 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 RMDN3Q96TC7 470 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 SPZ1Q9BXG8 430 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 WDR11Q9BZH6 1224 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 POLR3EQ9NVU0 708 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 GNEQ9Y223 722 aaKnown RBP11.83□□□□□ -0.52
CCM2-208ENST00000476594 TRIOBPQ9H2D6 2365 aa11.83□□□□□ -0.52
CCM2-208ENST00000476594 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
CCM2-208ENST00000476594 EPB41L2O43491 1005 aaKnown RBP11.82□□□□□ -0.52
CCM2-208ENST00000476594 PQBP1O60828 265 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms