RNA–Protein interactions for RNA: ENST00000476517.1

CDKAL1-203, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 2

Gene CDKAL1, Length 840 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-203ENST00000476517 FOSP01100 380 aaPredicted RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 OR52Z1P0C646 297 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 PTPRAP18433 802 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 LONP1P36776 959 aaKnown RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 CLK2P49760 499 aaKnown RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 MTMR2Q13614 643 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 LETM2Q2VYF4 491 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 USH1GQ495M9 461 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 CCDC84Q86UT8 332 aaPredicted RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 ZNF280CQ8ND82 737 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 SLF1Q9BQI6 1058 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 FUCA2Q9BTY2 467 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 TANGO6Q9C0B7 1094 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 CSRNP2Q9H175 543 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 EHMT1Q9H9B1 1298 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 TMEM260Q9NX78 707 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 CSADQ9Y600 493 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 LOXHD1Q8IVV2 1947 aa14.07□□□□□ -0.16
CDKAL1-203ENST00000476517 THSD7BQ9C0I4 1608 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 RASSF10A6NK89 507 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 WNT7AO00755 349 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 CCNT1O60563 726 aaKnown RBP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 FDX1P10109 184 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 IREB2P48200 963 aaKnown RBP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 TYRO3Q06418 890 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 STX1AQ16623 288 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 UBE2SQ16763 222 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 DTHD1Q6ZMT9 781 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 KRT26Q7Z3Y9 468 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 CKAP2LQ8IYA6 745 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 ELOA2Q8IYF1 753 aaPredicted RBP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 TMOD4Q9NZQ9 345 aa14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 MRPL11Q9Y3B7 192 aaKnown RBP14.06□□□□□ -0.16
CDKAL1-203ENST00000476517 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 VCAM1P19320 739 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 BACE1P56817 501 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 SPP2Q13103 211 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 TMEM266Q2M3C6 531 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 PRAMEF18Q5VWM3 479 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 CCDC174Q6PII3 467 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 KRBA2Q6ZNG9 492 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 PNMA8AQ86V59 439 aaPredicted RBP14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 CNNM3Q8NE01 707 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 ZKSCAN4Q969J2 545 aaPredicted RBP14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 C12orf42Q96LP6 360 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 AK8Q96MA6 479 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 ANO3Q9BYT9 981 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 RBSNQ9H1K0 784 aa14.05□□□□□ -0.16
CDKAL1-203ENST00000476517 PIK3CDO00329 1044 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 ITGBL1O95965 494 aaPredicted RBP14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 SNAP25P60880 206 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 GRIN1Q05586 938 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 UVSSAQ2YD98 709 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 MOXD1Q6UVY6 613 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 SYMPKQ92797 1274 aaKnown RBP14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 RPAP3Q9H6T3 665 aaPredicted RBP14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 ANO10Q9NW15 660 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 TRPM7Q96QT4 1865 aa14.04□□□□□ -0.16
CDKAL1-203ENST00000476517 POLR2DO15514 142 aaKnown RBP14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 USP2O75604 605 aaPredicted RBP14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 FLOT1O75955 427 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 ICAM1P05362 532 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 CALCRLQ16602 461 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 PPP4R3AQ6IN85 833 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 LDHDQ86WU2 507 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 CEP57L1Q8IYX8 460 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 RASSF8Q8NHQ8 419 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 CDCA5Q96FF9 252 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 NAT10Q9H0A0 1025 aaKnown RBP14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 TAF1DQ9H5J8 278 aaPredicted RBP14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 CCPG1Q9ULG6 757 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 PPP1R9AQ9ULJ8 1098 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 ZHX2Q9Y6X8 837 aa14.03□□□□□ -0.16
CDKAL1-203ENST00000476517 MYPNQ86TC9 1320 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L15C9J2P7 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L13C9JLJ4 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L11C9JVI0 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L18D6R9N7 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L22D6RA61 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L17D6RBQ6 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L19D6RCP7 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 USP17L20D6RJB6 530 aa14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.17
CDKAL1-203ENST00000476517 MARCH6O60337 910 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms