RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 TAB2Q9NYJ8 693 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 NHSQ6T4R5 1651 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 POTEB2H3BUK9 544 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 OPLAHO14841 1288 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ZNF263O14978 683 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 CYTH3O43739 400 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 GUCY1A3Q02108 690 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 RNF187Q5TA31 235 aaPredicted RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 SMIM5Q71RC9 77 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 APBB1IPQ7Z5R6 666 aaPredicted RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 FAM228AQ86W67 206 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ADSSL1Q8N142 457 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 VPS16Q9H269 839 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 CEP131Q9UPN4 1083 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 GOLGA6BA6NDN3 693 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 FAM47AQ5JRC9 791 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 WDR93Q6P2C0 686 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 PIK3AP1Q6ZUJ8 805 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ESR2Q92731 530 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 PSMB7Q99436 277 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 DCP1AQ9NPI6 582 aaPredicted RBP9.34□□□□□ -0.91
VAPB-205ENST00000476395 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ODF2LQ9ULJ1 636 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 MAPK8IP1Q9UQF2 711 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ATAD5Q96QE3 1844 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 ARFGEF1Q9Y6D6 1849 aa9.34□□□□□ -0.91
VAPB-205ENST00000476395 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 ZNF658Q5TYW1 1059 aaPredicted RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 SND1Q7KZF4 910 aaKnown RBP eCLIP9.33□□□□□ -0.92
VAPB-205ENST00000476395 CCDC148Q8NFR7 591 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 DDX20Q9UHI6 824 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 ORC4O43929 436 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 ATP2C2O75185 946 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 DDAH1O94760 285 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 KRT14P02533 472 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 CALRP27797 417 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
VAPB-205ENST00000476395 PPP2R5BQ15173 497 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 MEA1Q16626 185 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 MIIPQ5JXC2 388 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 TXNRD3Q86VQ6 643 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 ATL2Q8NHH9 583 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 RASGRP4Q8TDF6 673 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 NELFBQ8WX92 580 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 UBAC1Q9BSL1 405 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 NACAP1Q9BZK3 213 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 LACRTQ9GZZ8 138 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 LRP2BPQ9P2M1 347 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 MINPP1Q9UNW1 487 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 DUSP10Q9Y6W6 482 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 PDS5AQ29RF7 1337 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 USP17L21D6R901 530 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 PSMD14O00487 310 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 GTPBP6O43824 516 aaPredicted RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 MYBPC2Q14324 1141 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 NEDD9Q14511 834 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 IFIT1BQ5T764 474 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 FBXO33Q7Z6M2 555 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 GBP3Q9H0R5 595 aa9.33□□□□□ -0.92
VAPB-205ENST00000476395 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 DMGDHQ9UI17 866 aaKnown RBP9.33□□□□□ -0.92
VAPB-205ENST00000476395 SHTN1A0MZ66 631 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 MECOMQ03112 1051 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 ZKSCAN8Q15776 578 aaPredicted RBP9.32□□□□□ -0.92
VAPB-205ENST00000476395 ANKRD18AQ8IVF6 992 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 CCDC51Q96ER9 411 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 AGPAT5Q9NUQ2 364 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 MAD2L2Q9UI95 211 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 C21orf2O43822 256 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 UPP2O95045 317 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 NDUFA10O95299 355 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 SCG2P13521 617 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 MCM7P33993 719 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 GRIK5Q16478 980 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 WHAMMP3Q1A5X7 153 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 PPFIBP1Q86W92 1011 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 IQCA1Q86XH1 822 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 CNGA4Q8IV77 575 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 MB21D1Q8N884 522 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 GPKOWQ92917 476 aaPredicted RBP eCLIP9.32□□□□□ -0.92
VAPB-205ENST00000476395 SCLT1Q96NL6 688 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 KLC4Q9NSK0 619 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 KBTBD4Q9NVX7 518 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 A0A0G2JS52 829 aa9.32□□□□□ -0.92
VAPB-205ENST00000476395 PARP1P09874 1014 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms