RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 EDNRBP24530 442 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 ALDH5A1P51649 535 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-216ENST00000475195 RCAN1P53805 252 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 BLOC1S2Q6QNY1 142 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 TCEANC2Q96MN5 208 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 JAKMIP1Q96N16 626 aaKnown RBP19.11■□□□□ 0.65
ATG4B-216ENST00000475195 TM6SF1Q9BZW5 370 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 C11orf49Q9H6J7 331 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 ZSWIM6Q9HCJ5 1215 aa19.11■□□□□ 0.65
ATG4B-216ENST00000475195 DUSP11O75319 330 aaKnown RBP19.1■□□□□ 0.65
ATG4B-216ENST00000475195 RARBP10826 455 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 CPA1P15085 419 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 RPS6KB1P23443 525 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 CALML3P27482 149 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 HSD17B4P51659 736 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 NKX3-2P78367 333 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 CCDC144BQ3MJ40 725 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 TAPT1Q6NXT6 567 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 SYNE3Q6ZMZ3 975 aa19.1■□□□□ 0.65
ATG4B-216ENST00000475195 SYTL5Q8TDW5 730 aaPredicted RBP19.1■□□□□ 0.65
ATG4B-216ENST00000475195 ADAMTS4O75173 837 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 PLEKHA8P1O95397 391 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 RXRAP19793 462 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 EVCP57679 992 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 PPP2R5BQ15173 497 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 LRRC41Q15345 812 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 ANO1Q5XXA6 986 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 IQSEC1Q6DN90 963 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 HOMER1Q86YM7 354 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 VTA1Q9NP79 307 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 XPNPEP3Q9NQH7 507 aa19.09■□□□□ 0.65
ATG4B-216ENST00000475195 ZHX1Q9UKY1 873 aaPredicted RBP19.09■□□□□ 0.65
ATG4B-216ENST00000475195 RBM47A0AV96 593 aaKnown RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 GJC2Q5T442 439 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 Q6ZUG5 572 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 RUFY3Q7L099 469 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 KLHDC9Q8NEP7 349 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 RRP36Q96EU6 259 aaKnown RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 TAAR1Q96RJ0 339 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 FAM217BQ9NTX9 383 aaPredicted RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 RBM28Q9NW13 759 aaKnown RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 COL20A1Q9P218 1284 aa19.08■□□□□ 0.64
ATG4B-216ENST00000475195 DDX49Q9Y6V7 483 aaKnown RBP19.08■□□□□ 0.64
ATG4B-216ENST00000475195 ZBTB43O43298 467 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 ADCY6O43306 1168 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 CASTP20810 708 aaKnown RBP19.07■□□□□ 0.64
ATG4B-216ENST00000475195 FUT2Q10981 343 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 CCSAPQ6IQ19 270 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-216ENST00000475195 MICU3Q86XE3 530 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 CMTR1Q8N1G2 835 aaKnown RBP19.07■□□□□ 0.64
ATG4B-216ENST00000475195 IL17RAQ96F46 866 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 IWS1Q96ST2 819 aa19.07■□□□□ 0.64
ATG4B-216ENST00000475195 UPF3AQ9H1J1 476 aaKnown RBP19.07■□□□□ 0.64
ATG4B-216ENST00000475195 GNEQ9Y223 722 aaKnown RBP19.07■□□□□ 0.64
ATG4B-216ENST00000475195 KLF18A0A0U1RQI7 1052 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 B4DLN1 442 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 PGK1P00558 417 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 CFBP00751 764 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 MRPL12P52815 198 aaKnown RBP19.06■□□□□ 0.64
ATG4B-216ENST00000475195 GJA9P57773 515 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 PRPF38BQ5VTL8 546 aaKnown RBP19.06■□□□□ 0.64
ATG4B-216ENST00000475195 RNF180Q86T96 592 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 RAB11FIP4Q86YS3 637 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 NSUN6Q8TEA1 469 aaKnown RBP19.06■□□□□ 0.64
ATG4B-216ENST00000475195 DPF3Q92784 378 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 BRF1Q92994 677 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 MPHOSPH6Q99547 160 aaKnown RBP19.06■□□□□ 0.64
ATG4B-216ENST00000475195 TSEN34Q9BSV6 310 aaKnown RBP19.06■□□□□ 0.64
ATG4B-216ENST00000475195 PDGFCQ9NRA1 345 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 Q9Y3F1 56 aa19.06■□□□□ 0.64
ATG4B-216ENST00000475195 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-216ENST00000475195 CTAGE5O15320 804 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 CST5P28325 142 aaPredicted RBP19.05■□□□□ 0.64
ATG4B-216ENST00000475195 ADCYAP1R1P41586 468 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 ANAPC15P60006 121 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 TNFAIP2Q03169 654 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 RMDN3Q96TC7 470 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 PHF24Q9UPV7 400 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 LRRC37A2A6NM11 1700 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 NID2Q14112 1375 aa19.05■□□□□ 0.64
ATG4B-216ENST00000475195 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 ALPK3Q96L96 1907 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 KBTBD13C9JR72 458 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 GCOM1H8Y6P7 765 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-216ENST00000475195 CEP290O15078 2479 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 POLR2MP0CAP2 368 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 SMPD1P17405 629 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 CDC27P30260 824 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 FGD1P98174 961 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 APOBRQ0VD83 1088 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 RTN1Q16799 776 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 C1orf53Q5VUE5 145 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 FBXO16Q8IX29 292 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-216ENST00000475195 LENG1Q96BZ8 264 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-216ENST00000475195 SENP6Q9GZR1 1112 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-216ENST00000475195 SEC63Q9UGP8 760 aaKnown RBP19.04■□□□□ 0.64
ATG4B-216ENST00000475195 CYP46A1Q9Y6A2 500 aa19.04■□□□□ 0.64
ATG4B-216ENST00000475195 DNAH12Q6ZR08 3092 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms