RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 UBA5Q9GZZ9 404 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 CPVLQ9H3G5 476 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 PRKAG2Q9UGJ0 569 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 LCTP09848 1927 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 SYNRGQ9UMZ2 1314 aa11.03□□□□□ -0.64
PDPN-204ENST00000475043 LRRC37A2A6NM11 1700 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 NFIBO00712 420 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 DUSP11O75319 330 aaKnown RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 CYP21A2P08686 494 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 PARP1P09874 1014 aaKnown RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 C6orf222P0C671 652 aaPredicted RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 CALML3P27482 149 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 BAATQ14032 418 aaPredicted RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 USH1GQ495M9 461 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 TRIM60Q495X7 471 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 KIAA1211Q6ZU35 1233 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 CYB5R4Q7L1T6 521 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 CENPQQ7L2Z9 268 aaPredicted RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 RALYLQ86SE5 291 aaKnown RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 TMC2Q8TDI7 906 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 ANKS1AQ92625 1134 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 PURBQ96QR8 312 aaKnown RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 GDF15Q99988 308 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 SPC25Q9HBM1 224 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 PRDM5Q9NQX1 630 aaPredicted RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 PNMA2Q9UL42 364 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 PHF24Q9UPV7 400 aa11.02□□□□□ -0.65
PDPN-204ENST00000475043 DDX49Q9Y6V7 483 aaKnown RBP11.02□□□□□ -0.65
PDPN-204ENST00000475043 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 A0A1W2PQ45 241 aaPredicted RBP11.01□□□□□ -0.65
PDPN-204ENST00000475043 A0A1W2PQY0 241 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ERICH2A1L162 156 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ADCY6O43306 1168 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ADAMTS4O75173 837 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 BMP8BP34820 402 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ACLYP53396 1101 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 TNFAIP2Q03169 654 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 CDC37Q16543 378 aaPredicted RBP11.01□□□□□ -0.65
PDPN-204ENST00000475043 ASPRV1Q53RT3 343 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 EEPD1Q7L9B9 569 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 SKAP1Q86WV1 359 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ADGRF4Q8IZF3 695 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 LBHD1Q9BQE6 289 aaPredicted RBP11.01□□□□□ -0.65
PDPN-204ENST00000475043 UBE2OQ9C0C9 1292 aaKnown RBP11.01□□□□□ -0.65
PDPN-204ENST00000475043 VAT1LQ9HCJ6 419 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
PDPN-204ENST00000475043 ASTN1O14525 1302 aa11.01□□□□□ -0.65
PDPN-204ENST00000475043 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
PDPN-204ENST00000475043 C11orf97A0A1B0GVM6 126 aaPredicted RBP11□□□□□ -0.65
PDPN-204ENST00000475043 E7EWF7 191 aa11□□□□□ -0.65
PDPN-204ENST00000475043 IFIT3O14879 490 aaKnown RBP11□□□□□ -0.65
PDPN-204ENST00000475043 KCNA10Q16322 511 aa11□□□□□ -0.65
PDPN-204ENST00000475043 GNASQ5JWF2 1037 aa11□□□□□ -0.65
PDPN-204ENST00000475043 SLC30A10Q6XR72 485 aa11□□□□□ -0.65
PDPN-204ENST00000475043 CHST3Q7LGC8 479 aa11□□□□□ -0.65
PDPN-204ENST00000475043 FBXO16Q8IX29 292 aaPredicted RBP11□□□□□ -0.65
PDPN-204ENST00000475043 PCSK9Q8NBP7 692 aaKnown RBP11□□□□□ -0.65
PDPN-204ENST00000475043 NCOA7Q8NI08 942 aa11□□□□□ -0.65
PDPN-204ENST00000475043 NUP133Q8WUM0 1156 aa11□□□□□ -0.65
PDPN-204ENST00000475043 CLEC4DQ8WXI8 215 aa11□□□□□ -0.65
PDPN-204ENST00000475043 MAP4K1Q92918 833 aa11□□□□□ -0.65
PDPN-204ENST00000475043 VTI1AQ96AJ9 217 aa11□□□□□ -0.65
PDPN-204ENST00000475043 TSEN34Q9BSV6 310 aaKnown RBP11□□□□□ -0.65
PDPN-204ENST00000475043 KATNBL1Q9H079 304 aa11□□□□□ -0.65
PDPN-204ENST00000475043 STARD7Q9NQZ5 370 aa11□□□□□ -0.65
PDPN-204ENST00000475043 RBM8AQ9Y5S9 174 aaKnown RBP11□□□□□ -0.65
PDPN-204ENST00000475043 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
PDPN-204ENST00000475043 WDR19Q8NEZ3 1342 aa11□□□□□ -0.65
PDPN-204ENST00000475043 CEP290O15078 2479 aa11□□□□□ -0.65
PDPN-204ENST00000475043 LTBP2Q14767 1821 aa11□□□□□ -0.65
PDPN-204ENST00000475043 MYADML2A6NDP7 307 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 MOXD2PA6NHM9 499 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 PQBP1O60828 265 aaKnown RBP10.99□□□□□ -0.65
PDPN-204ENST00000475043 ASGR1P07306 291 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 ALDH5A1P51649 535 aaPredicted RBP10.99□□□□□ -0.65
PDPN-204ENST00000475043 RPS6P62753 249 aaKnown RBP10.99□□□□□ -0.65
PDPN-204ENST00000475043 WTAPQ15007 396 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 SART3Q15020 963 aaKnown RBP10.99□□□□□ -0.65
PDPN-204ENST00000475043 SNX17Q15036 470 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 SEC23AQ15436 765 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 TDHQ8IZJ6 230 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 STAG2Q8N3U4 1231 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 KLHDC9Q8NEP7 349 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
PDPN-204ENST00000475043 GLT1D1Q96MS3 346 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 MPHOSPH6Q99547 160 aaKnown RBP10.99□□□□□ -0.65
PDPN-204ENST00000475043 AP5M1Q9H0R1 490 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 PDGFCQ9NRA1 345 aa10.99□□□□□ -0.65
PDPN-204ENST00000475043 KLRF2D3W0D1 207 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 CST5P28325 142 aaPredicted RBP10.98□□□□□ -0.65
PDPN-204ENST00000475043 GJA9P57773 515 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 BEX3Q00994 111 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 TLE2Q04725 743 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 PDE4DQ08499 809 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 QRICH1Q2TAL8 776 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 TMEM67Q5HYA8 995 aa10.98□□□□□ -0.65
PDPN-204ENST00000475043 C1orf53Q5VUE5 145 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms