RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 RPS6P62753 249 aaKnown RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 SSRP1Q08945 709 aaKnown RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 FUT2Q10981 343 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 SLC30A10Q6XR72 485 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 CUL5Q93034 780 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 TINF2Q9BSI4 451 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 RNF26Q9BY78 433 aaPredicted RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
COPS6-208ENST00000474823 LIMCH1Q9UPQ0 1083 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 SMCHD1A6NHR9 2005 aa12.14□□□□□ -0.47
COPS6-208ENST00000474823 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 GCOM1H8Y6P7 765 aaPredicted RBP12.13□□□□□ -0.47
COPS6-208ENST00000474823 PRPF3O43395 683 aaKnown RBP12.13□□□□□ -0.47
COPS6-208ENST00000474823 POLR2MP0CAP2 368 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 CCL5P13501 91 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 NAPAP54920 295 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
COPS6-208ENST00000474823 SCRN1Q12765 414 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 TRIM32Q13049 653 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 ME3Q16798 604 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 PFKFB3Q16875 520 aaPredicted RBP12.13□□□□□ -0.47
COPS6-208ENST00000474823 MAMDC4Q6UXC1 1216 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 DNERQ8NFT8 737 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
COPS6-208ENST00000474823 PHKBQ93100 1093 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 ZSCAN31Q96LW9 406 aaPredicted RBP12.13□□□□□ -0.47
COPS6-208ENST00000474823 RNF208Q9H0X6 261 aa12.13□□□□□ -0.47
COPS6-208ENST00000474823 SYNGAP1Q96PV0 1343 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 LOC102724159A0A0B4J2E5 919 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 SOWAHBA6NEL2 793 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 SCG2P13521 617 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 CNGA1P29973 690 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 HSD17B4P51659 736 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 PWP2Q15269 919 aaKnown RBP12.12□□□□□ -0.47
COPS6-208ENST00000474823 MTFR1Q15390 333 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 NTRK3Q16288 839 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 SMARCC2Q8TAQ2 1214 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 SYTL5Q8TDW5 730 aaPredicted RBP12.12□□□□□ -0.47
COPS6-208ENST00000474823 CCDC12Q8WUD4 166 aaPredicted RBP12.12□□□□□ -0.47
COPS6-208ENST00000474823 TBC1D5Q92609 795 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 UNC93B1Q9H1C4 597 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 PSTPIP2Q9H939 334 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 NRBP1Q9UHY1 535 aa12.12□□□□□ -0.47
COPS6-208ENST00000474823 PLXNA1Q9UIW2 1896 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 OPLAHO14841 1288 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 DEXIO95424 95 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 HOXA13P31271 388 aaPredicted RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 MCM2P49736 904 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 ALDH5A1P51649 535 aaPredicted RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 GHRHRQ02643 423 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 ARHGEF16Q5VV41 709 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 FCHSD1Q86WN1 690 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 NECAB1Q8N987 351 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 NSUN6Q8TEA1 469 aaKnown RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 GTF3C6Q969F1 213 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 FGD4Q96M96 766 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 RMDN3Q96TC7 470 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.47
COPS6-208ENST00000474823 GLT8D2Q9H1C3 349 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 ABHD16BQ9H3Z7 469 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 SH2B1Q9NRF2 756 aaPredicted RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
COPS6-208ENST00000474823 ZHX1Q9UKY1 873 aaPredicted RBP12.11□□□□□ -0.47
COPS6-208ENST00000474823 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 STXBP3O00186 592 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 MSCO60682 206 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 LARGE1O95461 756 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 IGHA2P01877 340 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 CYBAP13498 195 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 ADCY7P51828 1080 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 PDE4DQ08499 809 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 TAAR1Q96RJ0 339 aa12.1□□□□□ -0.47
COPS6-208ENST00000474823 SPDYE3A6NKU9 549 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 PIK3CDO00329 1044 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 SNAI1O95863 264 aaPredicted RBP12.09□□□□□ -0.47
COPS6-208ENST00000474823 GJB1P08034 283 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 XBP1P17861 261 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 EIF2AK2P19525 551 aaKnown RBP12.09□□□□□ -0.47
COPS6-208ENST00000474823 GNA11P29992 359 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
COPS6-208ENST00000474823 ACVR2BQ13705 512 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 PKN1Q16512 942 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 USP17L6PQ6QN14 398 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
COPS6-208ENST00000474823 CCDC83Q8IWF9 413 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms