RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TTC31Q49AM3 519 aaPredicted RBP23.76■■□□□ 1.39
SH3D21-202ENST00000474766 TBC1D10BQ4KMP7 808 aaPredicted RBP23.76■■□□□ 1.39
SH3D21-202ENST00000474766 PNMA8AQ86V59 439 aaPredicted RBP23.76■■□□□ 1.39
SH3D21-202ENST00000474766 TBC1D22AQ8WUA7 517 aa23.76■■□□□ 1.39
SH3D21-202ENST00000474766 PPM1EQ8WY54 764 aa23.76■■□□□ 1.39
SH3D21-202ENST00000474766 ANKS1AQ92625 1134 aa23.76■■□□□ 1.39
SH3D21-202ENST00000474766 SYMPKQ92797 1274 aaKnown RBP23.76■■□□□ 1.39
SH3D21-202ENST00000474766 CCDC51Q96ER9 411 aa23.76■■□□□ 1.39
SH3D21-202ENST00000474766 CORO7P57737 925 aa23.75■■□□□ 1.39
SH3D21-202ENST00000474766 CASP8Q14790 479 aa23.75■■□□□ 1.39
SH3D21-202ENST00000474766 USP50Q70EL3 339 aaPredicted RBP23.75■■□□□ 1.39
SH3D21-202ENST00000474766 DGKHQ86XP1 1220 aa23.75■■□□□ 1.39
SH3D21-202ENST00000474766 TTF2Q9UNY4 1162 aaKnown RBP23.75■■□□□ 1.39
SH3D21-202ENST00000474766 ROBO3Q96MS0 1386 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 KIF5BP33176 963 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 PLCD1P51178 756 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 PTPN21Q16825 1174 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 RBM46Q8TBY0 533 aaKnown RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 F8W031 263 aaPredicted RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 LDHBP07195 334 aaKnown RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 ZNF174Q15697 407 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 RBM26Q5T8P6 1007 aaKnown RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 WDR93Q6P2C0 686 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 PAGE5Q96GU1 130 aa23.74■■□□□ 1.39
SH3D21-202ENST00000474766 PUF60Q9UHX1 559 aaKnown RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 BAZ2BQ9UIF8 2168 aaKnown RBP23.74■■□□□ 1.39
SH3D21-202ENST00000474766 SOWAHDA6NJG2 315 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 EIF3CLB5ME19 914 aaKnown RBP23.73■■□□□ 1.39
SH3D21-202ENST00000474766 PTGDRQ13258 359 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 RAD9BQ6WBX8 426 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 PPFIBP1Q86W92 1011 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 LDHDQ86WU2 507 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 EIF3CQ99613 913 aaKnown RBP23.73■■□□□ 1.39
SH3D21-202ENST00000474766 IL17RBQ9NRM6 502 aa23.73■■□□□ 1.39
SH3D21-202ENST00000474766 CTAGE15A4D2H0 777 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 CTAGE8P0CG41 777 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 GTF2A1P52655 376 aaPredicted RBP23.72■■□□□ 1.39
SH3D21-202ENST00000474766 PPP4CP60510 307 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 KIF4BQ2VIQ3 1234 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 CTAGE6Q86UF2 777 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 CTAGE4Q8IX94 777 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 IRX2Q9BZI1 471 aaPredicted RBP23.72■■□□□ 1.39
SH3D21-202ENST00000474766 ZSWIM4Q9H7M6 989 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 MYOZ2Q9NPC6 264 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 LZTFL1Q9NQ48 299 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 GEMIN8Q9NWZ8 242 aaKnown RBP23.72■■□□□ 1.39
SH3D21-202ENST00000474766 CPP00450 1065 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 AARSP49588 968 aaKnown RBP eCLIP23.72■■□□□ 1.39
SH3D21-202ENST00000474766 NLRP5P59047 1200 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 TFAP4Q01664 338 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 MTF1Q14872 753 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 ZNF569Q5MCW4 686 aa23.72■■□□□ 1.39
SH3D21-202ENST00000474766 DHX37Q8IY37 1157 aaKnown RBP23.72■■□□□ 1.39
SH3D21-202ENST00000474766 PBX1P40424 430 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 GSTO1P78417 241 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 DPYDQ12882 1025 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 OGFOD1Q8N543 542 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 GSDMAQ96QA5 445 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 CTAGE1Q96RT6 745 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 NAPGQ99747 312 aaPredicted RBP23.71■■□□□ 1.39
SH3D21-202ENST00000474766 KAT14Q9H8E8 782 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 SH3GLB2Q9NR46 395 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 CLEC11AQ9Y240 323 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 POLR2AP24928 1970 aaKnown RBP23.71■■□□□ 1.39
SH3D21-202ENST00000474766 PPFIA4O75335 1185 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 LRRC31Q6UY01 552 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 TRMT44Q8IYL2 757 aaKnown RBP23.71■■□□□ 1.39
SH3D21-202ENST00000474766 SH3RF3Q8TEJ3 882 aaPredicted RBP23.71■■□□□ 1.39
SH3D21-202ENST00000474766 FAM107BQ9H098 131 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 TCP11L1Q9NUJ3 509 aa23.71■■□□□ 1.39
SH3D21-202ENST00000474766 ASTN2O75129 1339 aaPredicted RBP23.7■■□□□ 1.38
SH3D21-202ENST00000474766 N4BP1O75113 896 aaKnown RBP23.7■■□□□ 1.38
SH3D21-202ENST00000474766 MCM3P25205 808 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 CALML3P27482 149 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 VSNL1P62760 191 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 CCDC178Q5BJE1 867 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 CHADLQ6NUI6 762 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 PIK3AP1Q6ZUJ8 805 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 CNGA4Q8IV77 575 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 SMC1BQ8NDV3 1235 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 BCCIPQ9P287 314 aaKnown RBP eCLIP23.7■■□□□ 1.38
SH3D21-202ENST00000474766 SUGT1Q9Y2Z0 365 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 PCDHAC2Q9Y5I4 1007 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 ITIH6Q6UXX5 1313 aa23.7■■□□□ 1.38
SH3D21-202ENST00000474766 MFAP3LO75121 409 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 CUL4BQ13620 913 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 E2F4Q16254 413 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 MAP1SQ66K74 1059 aaPredicted RBP23.69■■□□□ 1.38
SH3D21-202ENST00000474766 APTXQ7Z2E3 356 aaKnown RBP23.69■■□□□ 1.38
SH3D21-202ENST00000474766 EFCAB13Q8IY85 973 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 IGSF22Q8N9C0 903 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 PNMA1Q8ND90 353 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 JRKLQ9Y4A0 524 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 ADAMTS3O15072 1205 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 BAG3O95817 575 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 GUCY2CP25092 1073 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 AFMP43652 599 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 GRM4Q14833 912 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 CCDC102AQ96A19 550 aa23.69■■□□□ 1.38
SH3D21-202ENST00000474766 DYNLL2Q96FJ2 89 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms