RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ATP6V1AP38606 617 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TNIP1Q15025 636 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 TMEM31Q5JXX7 168 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 C1orf122Q6ZSJ8 110 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 SPATS2Q86XZ4 545 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 DZIP1Q86YF9 867 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 MAFAQ8NHW3 353 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 ARHGEF2Q92974 986 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC113Q9H0I3 377 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 ZBTB3Q9H5J0 574 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 CNNM2Q9H8M5 875 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 HERC5Q9UII4 1024 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 AKAP12Q02952 1782 aa6.89□□□□□ -1.31
SMARCE1-208ENST00000474246 SBF1O95248 1867 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 GCC2Q8IWJ2 1684 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 B3GALNT1O75752 331 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 USP17L8P0C7I0 530 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 EN2P19622 333 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 SKOR1P84550 965 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 LRRC74AQ0VAA2 488 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 TBX2Q13207 712 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 ECM1Q16610 540 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 FAM109BQ6ICB4 259 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 PACS1Q6VY07 963 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 C16orf86Q6ZW13 317 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 NEK10Q6ZWH5 1172 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DDX42Q86XP3 938 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 RBM12BQ8IXT5 1001 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 BICD2Q8TD16 824 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DPF3Q92784 378 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 NAF1Q96HR8 494 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 ZMAT2Q96NC0 199 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 TACO1Q9BSH4 297 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DNAI2Q9GZS0 605 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 FANCFQ9NPI8 374 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 KRT82Q9NSB4 513 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 NOSIPQ9Y314 301 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 KIF3AQ9Y496 699 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DGKBQ9Y6T7 804 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 RASA4BC9J798 803 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 C6orf229H3BNL8 230 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 M0QX08 132 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 RASA4O43374 803 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 C21orf2O43822 256 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 TRIM27P14373 513 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 IRX1P78414 480 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DAB2P98082 770 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 SPDYCQ5MJ68 293 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 WWC2Q6AWC2 1192 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 SDCCAG8Q86SQ7 713 aaPredicted RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC65Q8IXS2 484 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 DZIP1LQ8IYY4 767 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 PI4K2BQ8TCG2 481 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 NUP133Q8WUM0 1156 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 UTP14AQ9BVJ6 771 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 RASSF1Q9NS23 344 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 LUC7L2Q9Y383 392 aaKnown RBP6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 C2CD2Q9Y426 696 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 EMILIN1Q9Y6C2 1016 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 SNCAIPQ9Y6H5 919 aa6.88□□□□□ -1.31
SMARCE1-208ENST00000474246 RNF123Q5XPI4 1314 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 KRT13P13646 458 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 KCNJ4P48050 445 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 RCAN1P53805 252 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 ARHGAP4P98171 946 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 PRKG2Q13237 762 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 MTMR2Q13614 643 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 MLC1Q15049 377 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 CNGA3Q16281 694 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 PDCD2Q16342 344 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 LRIT3Q3SXY7 679 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 RRP12Q5JTH9 1297 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 METTL24Q5JXM2 366 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 TCEAL8Q8IYN2 117 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 DCLK2Q8N568 766 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 LILRB1Q8NHL6 650 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 SUN5Q8TC36 379 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 DHTKD1Q96HY7 919 aaPredicted RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 C1orf74Q96LT6 269 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 STRBPQ96SI9 672 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 ZCCHC17Q9NP64 241 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 PLCB1Q9NQ66 1216 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 CCDC87Q9NVE4 849 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 RNF186Q9NXI6 227 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 TMEM98Q9Y2Y6 226 aa6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 RBBP6Q7Z6E9 1792 aaKnown RBP6.87□□□□□ -1.31
SMARCE1-208ENST00000474246 ELL2O00472 640 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 CASQ2O14958 399 aaPredicted RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ZBTB39O15060 712 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 ACTN4O43707 911 aaKnown RBP6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 PLOD3O60568 738 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 TRPA1O75762 1119 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 SERPINB3P29508 390 aa6.86□□□□□ -1.31
SMARCE1-208ENST00000474246 GJA8P48165 433 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms