RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 SH3GLB2Q9NR46 395 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 FLRT1Q9NZU1 646 aa11.95□□□□□ -0.5
CASC3-204ENST00000474190 MRPL11Q9Y3B7 192 aaKnown RBP11.95□□□□□ -0.5
CASC3-204ENST00000474190 COL11A1P12107 1806 aaPredicted RBP11.95□□□□□ -0.5
CASC3-204ENST00000474190 FRMPD4Q14CM0 1322 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 hCG_1984214I3L0E3 225 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 EDNRBP24530 442 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 HOXA13P31271 388 aaPredicted RBP11.94□□□□□ -0.5
CASC3-204ENST00000474190 COPB2P35606 906 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 CCNA1P78396 465 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 UBE2SQ16763 222 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 OTOP1Q7RTM1 612 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 ZNF713Q8N859 430 aaPredicted RBP11.94□□□□□ -0.5
CASC3-204ENST00000474190 DAGLBQ8NCG7 672 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 MAF1Q9H063 256 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 FOXD4L1Q9NU39 408 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 RBM27Q9P2N5 1060 aaKnown RBP11.94□□□□□ -0.5
CASC3-204ENST00000474190 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
CASC3-204ENST00000474190 FBXO40Q9UH90 709 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 PNMA2Q9UL42 364 aa11.94□□□□□ -0.5
CASC3-204ENST00000474190 PLXNB2O15031 1838 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 RPTORQ8N122 1335 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 SMCO2A6NFE2 343 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 KIF28PB7ZC32 967 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 STRNO43815 780 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 FLT3LGP49771 235 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 NAPAP54920 295 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 HMGN5P82970 282 aaKnown RBP11.93□□□□□ -0.5
CASC3-204ENST00000474190 MAP2K5Q13163 448 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 CCL14Q16627 93 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 KRT40Q6A162 431 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
CASC3-204ENST00000474190 NSMFQ6X4W1 530 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 TRIM22Q8IYM9 498 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 FBXO18Q8NFZ0 1043 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 IL31RAQ8NI17 732 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 RASGRP4Q8TDF6 673 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 TAAR1Q96RJ0 339 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 MMP19Q99542 508 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 KATNBL1Q9H079 304 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 PSTPIP2Q9H939 334 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 TMEM260Q9NX78 707 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 SRRDQ9UH36 339 aa11.93□□□□□ -0.5
CASC3-204ENST00000474190 FAM205CA6NFA0 338 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 WNT7AO00755 349 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 TNPO2O14787 897 aaKnown RBP11.92□□□□□ -0.5
CASC3-204ENST00000474190 FCER1AP12319 257 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 FCGRTP55899 365 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 NR5A1Q13285 461 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 PKP1Q13835 747 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 RNF207Q6ZRF8 634 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
CASC3-204ENST00000474190 PCDHA6Q9UN73 950 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 PCDHA8Q9Y5H6 950 aa11.92□□□□□ -0.5
CASC3-204ENST00000474190 RGS20O76081 388 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 CFBP00751 764 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 MMP1P03956 469 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 XRCC5P13010 732 aaKnown RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 FOSBP53539 338 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 TRIM32Q13049 653 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 IRF5Q13568 498 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 KCTD2Q14681 263 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 MAMDC4Q6UXC1 1216 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 SAMD3Q8N6K7 520 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 TRIB2Q92519 343 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 MAML3Q96JK9 1138 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 PGBD1Q96JS3 809 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 MAP3K20Q9NYL2 800 aaKnown RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 BIN2Q9UBW5 565 aaPredicted RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 MTMR6Q9Y217 621 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 CTDP1Q9Y5B0 961 aaPredicted RBP11.91□□□□□ -0.5
CASC3-204ENST00000474190 LCTP09848 1927 aa11.91□□□□□ -0.5
CASC3-204ENST00000474190 ZNF236Q9UL36 1845 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 PFASO15067 1338 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 BTBD18B2RXH4 712 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 GCOM1H8Y6P7 765 aaPredicted RBP11.9□□□□□ -0.5
CASC3-204ENST00000474190 POLR2MP0CAP2 368 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 SYT1P21579 422 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 U2AF2P26368 475 aaKnown RBP eCLIP11.9□□□□□ -0.5
CASC3-204ENST00000474190 CALML3P27482 149 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 ADCY7P51828 1080 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 MRPS9P82933 396 aaKnown RBP11.9□□□□□ -0.5
CASC3-204ENST00000474190 AKAP17AQ02040 695 aaKnown RBP11.9□□□□□ -0.5
CASC3-204ENST00000474190 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 ZNF467Q7Z7K2 595 aaPredicted RBP11.9□□□□□ -0.5
CASC3-204ENST00000474190 MCF2L2Q86YR7 1114 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 TEX2Q8IWB9 1127 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 DOCK3Q8IZD9 2030 aa11.9□□□□□ -0.5
CASC3-204ENST00000474190 BLIDQ8IZY5 108 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms