RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 CCL5P13501 91 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 IFNAR1P17181 557 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 CNGA1P29973 690 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 CACNB2Q08289 660 aaPredicted RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 MTFR1Q15390 333 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 TRIM22Q8IYM9 498 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 MSL3Q8N5Y2 521 aaKnown RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 GPKOWQ92917 476 aaPredicted RBP eCLIP14.32□□□□□ -0.12
DDX56-209ENST00000473924 PURBQ96QR8 312 aaKnown RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 MPHOSPH6Q99547 160 aaKnown RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 SLC26A6Q9BXS9 759 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 UNC93B1Q9H1C4 597 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 CNPY2Q9Y2B0 182 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 RPTORQ8N122 1335 aa14.32□□□□□ -0.12
DDX56-209ENST00000473924 RBBP6Q7Z6E9 1792 aaKnown RBP14.32□□□□□ -0.12
DDX56-209ENST00000473924 SOWAHBA6NEL2 793 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 ASB14A6NK59 587 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 B4DLN1 442 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 GCOM1H8Y6P7 765 aaPredicted RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 hCG_1984214I3L0E3 225 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 PRPF3O43395 683 aaKnown RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 PFKFB2O60825 505 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 CDKL5O76039 1030 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 POLR2MP0CAP2 368 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 MRPL12P52815 198 aaKnown RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 NAPAP54920 295 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 SSRP1Q08945 709 aaKnown RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 SCRN1Q12765 414 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 NTRK3Q16288 839 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 SAMD3Q8N6K7 520 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 CUL5Q93034 780 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 RNF26Q9BY78 433 aaPredicted RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 MAP3K20Q9NYL2 800 aaKnown RBP14.31□□□□□ -0.12
DDX56-209ENST00000473924 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 SYNGAP1Q96PV0 1343 aa14.31□□□□□ -0.12
DDX56-209ENST00000473924 OPLAHO14841 1288 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 SCG2P13521 617 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 HOXA13P31271 388 aaPredicted RBP14.3□□□□□ -0.12
DDX56-209ENST00000473924 ALDH5A1P51649 535 aaPredicted RBP14.3□□□□□ -0.12
DDX56-209ENST00000473924 HSD17B4P51659 736 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 ME3Q16798 604 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 PFKFB3Q16875 520 aaPredicted RBP14.3□□□□□ -0.12
DDX56-209ENST00000473924 PRAMEF19Q5SWL8 479 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 MAP3K21Q5TCX8 1036 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 WWC2Q6AWC2 1192 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 MAMDC4Q6UXC1 1216 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 ARMCX2Q7L311 632 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 NECAB1Q8N987 351 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 IL27Q8NEV9 243 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 DNERQ8NFT8 737 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 SYTL5Q8TDW5 730 aaPredicted RBP14.3□□□□□ -0.12
DDX56-209ENST00000473924 FGD4Q96M96 766 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.3□□□□□ -0.12
DDX56-209ENST00000473924 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.3□□□□□ -0.12
DDX56-209ENST00000473924 HTTP42858 3142 aa14.3□□□□□ -0.12
DDX56-209ENST00000473924 LARGE1O95461 756 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 IGHA2P01877 340 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 CYBAP13498 195 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 CCND3P30281 292 aaPredicted RBP14.29□□□□□ -0.12
DDX56-209ENST00000473924 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 PPP1R18Q6NYC8 613 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 SMARCC2Q8TAQ2 1214 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 NSUN6Q8TEA1 469 aaKnown RBP14.29□□□□□ -0.12
DDX56-209ENST00000473924 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
DDX56-209ENST00000473924 TAAR1Q96RJ0 339 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 RMDN3Q96TC7 470 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 NRBP1Q9UHY1 535 aa14.29□□□□□ -0.12
DDX56-209ENST00000473924 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
DDX56-209ENST00000473924 LOC102724159A0A0B4J2E5 919 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 STXBP3O00186 592 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 ASTN1O14525 1302 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 DEXIO95424 95 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
DDX56-209ENST00000473924 GJB1P08034 283 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 SOX10P56693 466 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 GHRHRQ02643 423 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 PDE4DQ08499 809 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 PWP2Q15269 919 aaKnown RBP14.28□□□□□ -0.12
DDX56-209ENST00000473924 CCDC12Q8WUD4 166 aaPredicted RBP14.28□□□□□ -0.12
DDX56-209ENST00000473924 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 DEFB118Q96PH6 123 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 ABHD16BQ9H3Z7 469 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
DDX56-209ENST00000473924 SMCO2A6NFE2 343 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 MSCO60682 206 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.13
DDX56-209ENST00000473924 ADCY7P51828 1080 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 ACVR2BQ13705 512 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 PKN1Q16512 942 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 USP17L6PQ6QN14 398 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 TRPV1Q8NER1 839 aa14.27□□□□□ -0.13
DDX56-209ENST00000473924 U2AF1L4Q8WU68 220 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms