RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 HMGB1P1B2RPK0 211 aaPredicted RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 ENC1O14682 589 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 OR52Z1P0C646 297 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SMARCA1P28370 1054 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 MAGEA1P43355 309 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 GNGT1P63211 74 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 ASIC1P78348 528 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SOGA3Q5TF21 947 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CACNA2D4Q7Z3S7 1137 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 TAX1BP1Q86VP1 789 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CCDC50Q8IVM0 306 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CD302Q8IX05 232 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SPATA4Q8NEY3 305 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CDK5RAP3Q96JB5 506 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 NAP1L4Q99733 375 aaKnown RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 TOGARAM1Q9Y4F4 1720 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 BCL9O00512 1426 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 FAM205CA6NFA0 338 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 H0YHG0 523 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 ANXA13P27216 316 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 BCAMP50895 628 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 KIF11P52732 1056 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 CHRNDQ07001 517 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 PDE4CQ08493 712 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 MAPK8IP2Q13387 824 aaPredicted RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 GRM4Q14833 912 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 NONOQ15233 471 aaKnown RBP eCLIP6.79□□□□□ -1.323e-7■■■■□ 23.9
HERC4-209ENST00000473533 NPY5RQ15761 445 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SLC9C1Q4G0N8 1177 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 EMC10Q5UCC4 262 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 IRF2BP1Q8IU81 584 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 SRBD1Q8N5C6 995 aaKnown RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 OTUD6BQ8N6M0 293 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 HELBQ8NG08 1087 aaPredicted RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 TAF4BQ92750 862 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 OSBPL9Q96SU4 736 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 MYCBPQ99417 103 aaPredicted RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 CDCA7Q9BWT1 371 aaPredicted RBP6.79□□□□□ -1.32
HERC4-209ENST00000473533 FAM169AQ9Y6X4 670 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 LAMB1P07942 1786 aa6.79□□□□□ -1.32
HERC4-209ENST00000473533 ATP8B3O60423 1300 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 MACROD2A1Z1Q3 448 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 VGLL3A8MV65 326 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 NDUFAB1O14561 156 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CASP1P29466 404 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CDC25AP30304 524 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 GSTO1P78417 241 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 MTMR3Q13615 1198 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CLUL1Q15846 466 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 LRIG3Q6UXM1 1119 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 RUFY4Q6ZNE9 571 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 GUF1Q8N442 669 aaKnown RBP6.78□□□□□ -1.32
HERC4-209ENST00000473533 C4orf32Q8N8J7 132 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 SDR42E1Q8WUS8 393 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 STAMQ92783 540 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 P3H4Q92791 437 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 LRRC45Q96CN5 670 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 ANKRD2Q9GZV1 360 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 ASAP1Q9ULH1 1129 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 TACC3Q9Y6A5 838 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 MAST2Q6P0Q8 1798 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 KLRC4O43908 158 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CCT5P48643 541 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 EARS2Q5JPH6 523 aaKnown RBP6.78□□□□□ -1.32
HERC4-209ENST00000473533 KDM7AQ6ZMT4 941 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 FMNL3Q8IVF7 1028 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 NKX2-3Q8TAU0 364 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 ACTR5Q9H9F9 607 aaPredicted RBP6.78□□□□□ -1.32
HERC4-209ENST00000473533 BMP2KQ9NSY1 1161 aaPredicted RBP6.78□□□□□ -1.32
HERC4-209ENST00000473533 HDAC6Q9UBN7 1215 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 LRWD1Q9UFC0 647 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 RDXP35241 583 aaKnown RBP6.78□□□□□ -1.32
HERC4-209ENST00000473533 C2orf54Q08AI8 447 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 UNC13DQ70J99 1090 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CREG2Q8IUH2 290 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 TRIM9Q9C026 710 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 NDST4Q9H3R1 872 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 CCDC87Q9NVE4 849 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 ZBTB1Q9Y2K1 713 aa6.78□□□□□ -1.32
HERC4-209ENST00000473533 ZC3H4Q9UPT8 1303 aaKnown RBP6.77□□□□□ -1.32
HERC4-209ENST00000473533 A0A0U1RQJ8 604 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 USP17L12C9JPN9 530 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 USP17L21D6R901 530 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 CUL1Q13616 776 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 PPP2R5EQ16537 467 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 CENPPQ6IPU0 288 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 CROCCP2Q86T23 111 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 C2CD5Q86YS7 1000 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 ATRIPQ8WXE1 791 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 MTRQ99707 1265 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 DUSP9Q99956 384 aaKnown RBP6.77□□□□□ -1.33
HERC4-209ENST00000473533 NCAPGQ9BPX3 1015 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 BSDC1Q9NW68 430 aaPredicted RBP6.77□□□□□ -1.33
HERC4-209ENST00000473533 RNF216Q9NWF9 866 aaPredicted RBP6.77□□□□□ -1.33
HERC4-209ENST00000473533 BARHL2Q9NY43 387 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 CEP72Q9P209 647 aa6.77□□□□□ -1.33
HERC4-209ENST00000473533 SEC63Q9UGP8 760 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms