RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 GSPT1P15170 499 aaKnown RBP17.92■□□□□ 0.46
VTI1A-203ENST00000472892 EPHB4P54760 987 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 FSCN1Q16658 493 aaKnown RBP17.92■□□□□ 0.46
VTI1A-203ENST00000472892 TMEM63BQ5T3F8 832 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 ENAHQ8N8S7 591 aaPredicted RBP17.92■□□□□ 0.46
VTI1A-203ENST00000472892 RGS22Q8NE09 1264 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 KRT23Q9C075 422 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 UBA5Q9GZZ9 404 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 AP5M1Q9H0R1 490 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 KAT14Q9H8E8 782 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 CNNM2Q9H8M5 875 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 STXBP5LQ9Y2K9 1186 aa17.92■□□□□ 0.46
VTI1A-203ENST00000472892 LAMA2P24043 3122 aaKnown RBP17.91■□□□□ 0.46
VTI1A-203ENST00000472892 COL6A3P12111 3177 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 RBM47A0AV96 593 aaKnown RBP17.91■□□□□ 0.46
VTI1A-203ENST00000472892 CABYRO75952 493 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 PTGS1P23219 599 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 RPS6P62753 249 aaKnown RBP17.91■□□□□ 0.46
VTI1A-203ENST00000472892 FPGSQ05932 587 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 DUSP28Q4G0W2 176 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 CXCL17Q6UXB2 119 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 KIAA1211Q6ZU35 1233 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 FAM126BQ8IXS8 530 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 SLC43A3Q8NBI5 491 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 MAF1Q9H063 256 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 CPVLQ9H3G5 476 aa17.91■□□□□ 0.46
VTI1A-203ENST00000472892 ZEB2O60315 1214 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 CD4P01730 458 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 CALML3P27482 149 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 DNERQ8NFT8 737 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 SEZ6LQ9BYH1 1024 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 TNKSO95271 1327 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 LCTP09848 1927 aa17.9■□□□□ 0.46
VTI1A-203ENST00000472892 LAMA4Q16363 1823 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 EDNRBP24530 442 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 SMAD3P84022 425 aaKnown RBP17.89■□□□□ 0.45
VTI1A-203ENST00000472892 ASPRV1Q53RT3 343 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 MFSD5Q6N075 450 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 ADGRF4Q8IZF3 695 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 WDR11Q9BZH6 1224 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 GRIN2DO15399 1336 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 RAD50Q92878 1312 aa17.89■□□□□ 0.45
VTI1A-203ENST00000472892 TLR3O15455 904 aaKnown RBP17.88■□□□□ 0.45
VTI1A-203ENST00000472892 PARP1P09874 1014 aaKnown RBP17.88■□□□□ 0.45
VTI1A-203ENST00000472892 CHMLP26374 656 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
VTI1A-203ENST00000472892 ITGA7Q13683 1181 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 CDC37Q16543 378 aaPredicted RBP17.88■□□□□ 0.45
VTI1A-203ENST00000472892 USH1GQ495M9 461 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 RUFY2Q8WXA3 655 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 MPHOSPH6Q99547 160 aaKnown RBP17.88■□□□□ 0.45
VTI1A-203ENST00000472892 UBAC1Q9BSL1 405 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 LRRC37A2A6NM11 1700 aa17.88■□□□□ 0.45
VTI1A-203ENST00000472892 PDE4DQ08499 809 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 SEC23AQ15436 765 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 ZNF697Q5TEC3 545 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 SLC17A8Q8NDX2 589 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 RNPC3Q96LT9 517 aaKnown RBP17.87■□□□□ 0.45
VTI1A-203ENST00000472892 GUCD1Q96NT3 240 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 JMJD4Q9H9V9 463 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 ABCB11O95342 1321 aa17.87■□□□□ 0.45
VTI1A-203ENST00000472892 B4DLN1 442 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 MRPL12P52815 198 aaKnown RBP17.86■□□□□ 0.45
VTI1A-203ENST00000472892 PTH1RQ03431 593 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 IFIT1BQ5T764 474 aaKnown RBP17.86■□□□□ 0.45
VTI1A-203ENST00000472892 CYB5R4Q7L1T6 521 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 C16orf59Q7L2K0 433 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 TMEM199Q8N511 208 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 TBC1D5Q92609 795 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 SEMA6BQ9H3T3 888 aa17.86■□□□□ 0.45
VTI1A-203ENST00000472892 NKRFO15226 690 aaKnown RBP eCLIP17.85■□□□□ 0.45
VTI1A-203ENST00000472892 CYP21A2P08686 494 aa17.85■□□□□ 0.45
VTI1A-203ENST00000472892 PPIGQ13427 754 aaKnown RBP eCLIP17.85■□□□□ 0.45
VTI1A-203ENST00000472892 QRICH1Q2TAL8 776 aa17.85■□□□□ 0.45
VTI1A-203ENST00000472892 MCF2L2Q86YR7 1114 aa17.85■□□□□ 0.45
VTI1A-203ENST00000472892 SCFD2Q8WU76 684 aa17.85■□□□□ 0.45
VTI1A-203ENST00000472892 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.85■□□□□ 0.45
VTI1A-203ENST00000472892 VAT1LQ9HCJ6 419 aa17.85■□□□□ 0.45
VTI1A-203ENST00000472892 CSF2RAP15509 400 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 CPT1AP50416 773 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 PSMC6P62333 389 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 TRDNQ13061 729 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 FBXO11Q86XK2 927 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 STAG2Q8N3U4 1231 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 SYTL5Q8TDW5 730 aaPredicted RBP17.84■□□□□ 0.45
VTI1A-203ENST00000472892 FAM161BQ96MY7 647 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 TAAR1Q96RJ0 339 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
VTI1A-203ENST00000472892 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
VTI1A-203ENST00000472892 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 PALM3A6NDB9 673 aaPredicted RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 SGSM2O43147 1006 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 CYP2C18P33260 490 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 PURAQ00577 322 aaKnown RBP17.83■□□□□ 0.44
VTI1A-203ENST00000472892 PPP2R5BQ15173 497 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 TMEM240Q5SV17 173 aa17.83■□□□□ 0.44
VTI1A-203ENST00000472892 RASIP1Q5U651 963 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms