RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC171-205ENST00000472806 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 RETREG3Q86VR2 466 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 DYNLL2Q96FJ2 89 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 AK8Q96MA6 479 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 TMEM47Q9BQJ4 181 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 CUEDC2Q9H467 287 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 IL17RBQ9NRM6 502 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 MAD2L2Q9UI95 211 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 PARP3Q9Y6F1 533 aa8.64□□□□□ -1.03
CCDC171-205ENST00000472806 A0A087WWV3 80 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 ESYT2A0FGR8 921 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 VWA3AA6NCI4 1184 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 GOLGA6L9A6NEM1 432 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 KLRF2D3W0D1 207 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 ZSCAN12O43309 604 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 TRIM37O94972 964 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 TPM1P09493 284 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 MCM7P33993 719 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 PPP1R2P41236 205 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 NOVP48745 357 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 RHBDL3P58872 404 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 FKBP1AP62942 108 aaKnown RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 GTF2IP78347 998 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 CCZ1BP86790 482 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 CCZ1P86791 482 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 DDR1Q08345 913 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 HSP90AA2PQ14568 343 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SYCP1Q15431 976 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 NPY5RQ15761 445 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SPECC1Q5M775 1068 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SPATA1Q5VX52 437 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 CEP135Q66GS9 1140 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 ZNF772Q68DY9 489 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 ISM2Q6H9L7 571 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 HHIPL2Q6UWX4 724 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 DPP8Q6V1X1 898 aaPredicted RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 USP17L1Q7RTZ2 530 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 TRIM46Q7Z4K8 759 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 HEATR3Q7Z4Q2 680 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 VSTM4Q8IW00 320 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 PDILTQ8N807 584 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 PAGE5Q96GU1 130 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 MASTLQ96GX5 879 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 MRIQ9BWK5 157 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 POLLQ9UGP5 575 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 SAP30BPQ9UHR5 308 aaKnown RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 NFE2L3Q9Y4A8 694 aa8.63□□□□□ -1.03
CCDC171-205ENST00000472806 DDX60LQ5H9U9 1706 aaKnown RBP8.63□□□□□ -1.03
CCDC171-205ENST00000472806 hCG_1642624A0A1W2PR95 340 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 SMIM22K7EJ46 135 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 STXBP3O00186 592 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 SRGNP10124 158 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 STAT6P42226 847 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 NAPAP54920 295 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 GRIN1Q05586 938 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 DPYDQ12882 1025 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 STIM1Q13586 685 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 NONOQ15233 471 aaKnown RBP eCLIP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 LINC01559Q495D7 138 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 EARS2Q5JPH6 523 aaKnown RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 WWC2Q6AWC2 1192 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 FOXP4Q8IVH2 680 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 CCAR2Q8N163 923 aaKnown RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 C17orf53Q8N3J3 647 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 KIF18AQ8NI77 898 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 TEKT1Q969V4 418 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 SHISA4Q96DD7 197 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 CCDC17Q96LX7 622 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 C16orf45Q96MC5 204 aaPredicted RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
CCDC171-205ENST00000472806 ZMYND12Q9H0C1 365 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 GLT8D2Q9H1C3 349 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 PDCL3Q9H2J4 239 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 FANCLQ9NW38 375 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 PCDHA6Q9UN73 950 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 DAGLAQ9Y4D2 1042 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 LTBP1Q14766 1721 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 QSER1Q2KHR3 1735 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 NRXN2Q9P2S2 1712 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 SNED1Q8TER0 1413 aa8.62□□□□□ -1.03
CCDC171-205ENST00000472806 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 M0R2N6 131 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 WIPF1O43516 503 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 TTLL1O95922 423 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 ZNF18P17022 549 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 UBA7P41226 1012 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 AFMP43652 599 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
CCDC171-205ENST00000472806 AMPD3Q01432 767 aa8.61□□□□□ -1.03
CCDC171-205ENST00000472806 GRIK5Q16478 980 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms