RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, human

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZIC4-208	ENST00000472749	LIFR	P42702	1097 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	KANK3	Q6NY19	840 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	C3orf67	Q6ZVT6	689 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	NELFB	Q8WX92	580 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	STAMBPL1	Q96FJ0	436 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	UBA5	Q9GZZ9	404 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	VCPKMT	Q9H867	229 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	JADE2	Q9NQC1	790 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	FBXO2	Q9UK22	296 aa	Predicted RBP	10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	NAPA	P54920	295 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	PDCD2	Q16342	344 aa	Predicted RBP	10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	PTPRO	Q16827	1216 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	DYM	Q7RTS9	669 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	PNMA8A	Q86V59	439 aa	Predicted RBP	10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	FCHSD1	Q86WN1	690 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	B4GALNT2	Q8NHY0	566 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	SELENOO	Q9BVL4	669 aa		10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	PPAN	Q9NQ55	473 aa	Known RBP	10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	CHCHD3	Q9NX63	227 aa	Known RBP	10.79	□□□□□ -0.68
ZIC4-208	ENST00000472749	SHOX2	O60902	331 aa	Predicted RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	CUL4B	Q13620	913 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	SLC51A	Q86UW1	340 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	CCDC47	Q96A33	483 aa	Known RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	CCDC97	Q96F63	343 aa	Predicted RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	WDR19	Q8NEZ3	1342 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	TCRBV5S4A2T	A0A5A2	114 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749		E7EVH7	732 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	WNT7A	O00755	349 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	STX10	O60499	249 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	RNASE9	P60153	205 aa	Known RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	RPS8	P62241	208 aa	Known RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	SLC30A9	Q6PML9	568 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	DTHD1	Q6ZMT9	781 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	RASGRP2	Q7LDG7	609 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	PAGE5	Q96GU1	130 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	TBC1D7	Q9P0N9	293 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	BACH1	O14867	736 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	CCNT1	O60563	726 aa	Known RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	TXK	P42681	527 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	MECOM	Q03112	1051 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	FAM228A	Q86W67	206 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	VGLL2	Q8N8G2	317 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	SPAG5	Q96R06	1193 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	NAPG	Q99747	312 aa	Predicted RBP	10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	ATP6V0A4	Q9HBG4	840 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	L3MBTL1	Q9Y468	752 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	GRIN2D	O15399	1336 aa		10.78	□□□□□ -0.68
ZIC4-208	ENST00000472749	SRGAP2	O75044	1071 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	SMIM24	O75264	130 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	ABL1	P00519	1130 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	SLC8A1	P32418	973 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	MDM2	Q00987	491 aa	Predicted RBP	10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	ICA1	Q05084	483 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	ITPK1	Q13572	414 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	NAA35	Q5VZE5	725 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	FUK	Q8N0W3	1084 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	ANKRD13C	Q8N6S4	541 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	HPS3	Q969F9	1004 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	MED15	Q96RN5	788 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	PLA2G12B	Q9BX93	195 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	TSGA10	Q9BZW7	698 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	MMRN2	Q9H8L6	949 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	SLC39A2	Q9NP94	309 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	LMCD1	Q9NZU5	365 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	MST1R	Q04912	1400 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	RIC1	Q4ADV7	1423 aa		10.77	□□□□□ -0.68
ZIC4-208	ENST00000472749	RTL9	Q8NET4	1388 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	RASSF9	O75901	435 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	KIF5B	P33176	963 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	AARS	P49588	968 aa	Known RBP eCLIP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	HDLBP	Q00341	1268 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	C1QTNF12	Q5T7M4	302 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	MYLK4	Q86YV6	388 aa	Predicted RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	TMEM139	Q8IV31	216 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	STAG2	Q8N3U4	1231 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	ENOX1	Q8TC92	643 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	TCP11	Q8WWU5	503 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	EZH1	Q92800	747 aa	Predicted RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	ARL8A	Q96BM9	186 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	FOXP1	Q9H334	677 aa	Predicted RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	GPCPD1	Q9NPB8	672 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	HDAC6	Q9UBN7	1215 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	FRMPD2	Q68DX3	1309 aa	Predicted RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	KRT18	P05783	430 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	LDHB	P07195	334 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	CLTA	P09496	248 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	PYGB	P11216	843 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	PLCD1	P51178	756 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	MFSD4B	Q5TF39	518 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	MSL1	Q68DK7	614 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	PRDM16	Q9HAZ2	1276 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	TCP11L1	Q9NUJ3	509 aa		10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	SRPRB	Q9Y5M8	271 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.77	□□□□□ -0.69
ZIC4-208	ENST00000472749	AGPS	O00116	658 aa		10.76	□□□□□ -0.69
ZIC4-208	ENST00000472749	CD44	P16070	742 aa	Known RBP	10.76	□□□□□ -0.69
ZIC4-208	ENST00000472749	RFC4	P35249	363 aa		10.76	□□□□□ -0.69
ZIC4-208	ENST00000472749	PPP1R7	Q15435	360 aa		10.76	□□□□□ -0.69

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