RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KRBA2Q6ZNG9 492 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 C1orf229Q6ZS94 237 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 PNMA8AQ86V59 439 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 CMTR2Q8IYT2 770 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 TMEM87BQ96K49 555 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 TBCBQ99426 244 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 CYP26B1Q9NR63 512 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 ZNF281Q9Y2X9 895 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 CFTRP13569 1480 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 SHISA3A0PJX4 238 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 H0Y8X5 98 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 H3BRJ5 948 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 UPP2O95045 317 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 CKMP06732 381 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 HOXD8P13378 290 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 PTPRAP18433 802 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 ALDH5A1P51649 535 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 SUMO1P63165 101 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 SCRN1Q12765 414 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 POU4F3Q15319 338 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 WDR44Q5JSH3 913 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 TMEM201Q5SNT2 666 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 TRIM59Q8IWR1 403 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 RBM12BQ8IXT5 1001 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 TAB3Q8N5C8 712 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 IL22RA1Q8N6P7 574 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 JADE3Q92613 823 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 DIO2Q92813 273 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 ZNF669Q96BR6 464 aaPredicted RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 TRMT2BQ96GJ1 504 aaKnown RBP3.35□□□□□ -1.87
XRN1-210ENST00000472697 TEKT5Q96M29 485 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 GP6Q9HCN6 339 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 GJB4Q9NTQ9 266 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 PPP2R3BQ9Y5P8 575 aa3.35□□□□□ -1.87
XRN1-210ENST00000472697 NEURL1BA8MQ27 555 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 F5H423 210 aaPredicted RBP3.34□□□□□ -1.87
XRN1-210ENST00000472697 CBX4O00257 560 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 NCK2O43639 380 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 ZNF500O60304 480 aaPredicted RBP3.34□□□□□ -1.87
XRN1-210ENST00000472697 MAN1A2O60476 641 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 BRINP1O60477 761 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 RHOBTB3O94955 611 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 IL33O95760 270 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 ALDH2P05091 517 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 PYGLP06737 847 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 THBDP07204 575 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 SNRPB2P08579 225 aaKnown RBP3.34□□□□□ -1.87
XRN1-210ENST00000472697 CLEC2LP0C7M8 214 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 TNFAIP3P21580 790 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 FGFR3P22607 806 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 CTSKP43235 329 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 PRIM2P49643 509 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 SCNN1BP51168 640 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 LRRC14Q15048 493 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 DDB1Q16531 1140 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 SLC35F1Q5T1Q4 408 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 ARMC3Q5W041 872 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 CPZQ66K79 652 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 GGT6Q6P531 493 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 ELMSAN1Q6PJG2 1045 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 IGF2-ASQ6U949 168 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 OVCH2Q7RTZ1 564 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 HDXQ7Z353 690 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 PAF1Q8N7H5 531 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 UBASH3BQ8TF42 649 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 PTPRN2Q92932 1015 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 MAGEB10Q96LZ2 347 aaPredicted RBP3.34□□□□□ -1.87
XRN1-210ENST00000472697 TUBD1Q9UJT1 453 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 CBLCQ9ULV8 474 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 EMC9Q9Y3B6 208 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 PCDHA11Q9Y5I1 949 aa3.34□□□□□ -1.87
XRN1-210ENST00000472697 DISP3Q9P2K9 1392 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 PTPDC1A2A3K4 754 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 IQCA1LA6NCM1 817 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 A6NCN8 305 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 CCER2I3L3R5 266 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 DVL2O14641 736 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 RGS13O14921 159 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 KPNA5O15131 536 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 CLEC3AO75596 197 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 SNUPNO95149 360 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 ALBP02768 609 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 ASLP04424 464 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 CCND1P24385 295 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 ADH7P40394 386 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 GPR3P46089 330 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 RBM10P98175 930 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 ADCY1Q08828 1119 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 AUHQ13825 339 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 ACAP2Q15057 778 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 LRRFIP1Q32MZ4 808 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 ZBTB37Q5TC79 503 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 SLC41A1Q8IVJ1 513 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 SIRT2Q8IXJ6 389 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 FIBCD1Q8N539 461 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 PCDH19Q8TAB3 1148 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 PNISRQ8TF01 805 aaKnown RBP3.34□□□□□ -1.88
XRN1-210ENST00000472697 RAB24Q969Q5 203 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 HSPBAP1Q96EW2 488 aa3.34□□□□□ -1.88
XRN1-210ENST00000472697 ELAC2Q9BQ52 826 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms