RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 PUS10Q3MIT2 529 aaKnown RBP16.59■□□□□ 0.25
SMURF1-203ENST00000472627 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 STK11IPQ8N1F8 1099 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 LRRC47Q8N1G4 583 aaKnown RBP16.59■□□□□ 0.25
SMURF1-203ENST00000472627 CEP95Q96GE4 821 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 HAUS7Q99871 368 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 MTMR4Q9NYA4 1195 aa16.59■□□□□ 0.25
SMURF1-203ENST00000472627 LOC102724159A0A0B4J2E5 919 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 RAB11FIP3O75154 756 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 SLC1A4P43007 532 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 PURAQ00577 322 aaKnown RBP16.58■□□□□ 0.24
SMURF1-203ENST00000472627 PWP2Q15269 919 aaKnown RBP16.58■□□□□ 0.24
SMURF1-203ENST00000472627 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 TAPT1Q6NXT6 567 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 STAG1Q8WVM7 1258 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 KHSRPQ92945 711 aaKnown RBP eCLIP16.58■□□□□ 0.242e-7■■■■□ 21.8
SMURF1-203ENST00000472627 VWCEQ96DN2 955 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
SMURF1-203ENST00000472627 UBE2ZQ9H832 354 aaPredicted RBP16.58■□□□□ 0.24
SMURF1-203ENST00000472627 IGKV6D-41A0A0C4DH26 115 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 PARNO95453 639 aaKnown RBP16.57■□□□□ 0.24
SMURF1-203ENST00000472627 SLC3A2P08195 630 aaKnown RBP16.57■□□□□ 0.24
SMURF1-203ENST00000472627 TSPY3P0CV98 308 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 TSPY8P0CW00 308 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 TDO2P48775 406 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 LEXMQ3ZCV2 418 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 NSMFQ6X4W1 530 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 OR6J1Q8NGC5 347 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 GMCL1Q96IK5 515 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 WDR11Q9BZH6 1224 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 PUS7LQ9H0K6 701 aaKnown RBP16.57■□□□□ 0.24
SMURF1-203ENST00000472627 CYP39A1Q9NYL5 469 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 FAM50BQ9Y247 325 aa16.57■□□□□ 0.24
SMURF1-203ENST00000472627 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
SMURF1-203ENST00000472627 GNAT2P19087 354 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 PDE4BQ07343 736 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 FAM178BQ8IXR5 827 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 CAGE1Q8TC20 777 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 GDPD5Q8WTR4 605 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 TGS1Q96RS0 853 aaKnown RBP16.56■□□□□ 0.24
SMURF1-203ENST00000472627 STRBPQ96SI9 672 aaKnown RBP16.56■□□□□ 0.24
SMURF1-203ENST00000472627 MYH4Q9Y623 1939 aa16.56■□□□□ 0.24
SMURF1-203ENST00000472627 LPXNO60711 386 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 PLA2G6O60733 806 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 EFCAB14O75071 495 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 KCNA5P22460 613 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 PPP2R5BQ15173 497 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 MORC4Q8TE76 937 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 AFAP1L1Q8TED9 768 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 CCPG1Q9ULG6 757 aa16.55■□□□□ 0.24
SMURF1-203ENST00000472627 PLIN4Q96Q06 1357 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 B4DLN1 442 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 PRDM1O75626 825 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 APPP05067 770 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 PTGS1P23219 599 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
SMURF1-203ENST00000472627 WDR5P61964 334 aaKnown RBP16.54■□□□□ 0.24
SMURF1-203ENST00000472627 PTCRAQ6ISU1 281 aaPredicted RBP16.54■□□□□ 0.24
SMURF1-203ENST00000472627 RAD9AQ99638 391 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 NACAP1Q9BZK3 213 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 CD320Q9NPF0 282 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 TANC1Q9C0D5 1861 aa16.54■□□□□ 0.24
SMURF1-203ENST00000472627 COL4A4P53420 1690 aaPredicted RBP16.53■□□□□ 0.24
SMURF1-203ENST00000472627 MYH7P12883 1935 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
SMURF1-203ENST00000472627 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 DCXO43602 365 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 ARHGEF15O94989 841 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 RLBP1P12271 317 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 ALDH5A1P51649 535 aaPredicted RBP16.53■□□□□ 0.24
SMURF1-203ENST00000472627 PTPROQ16827 1216 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 CNKSR3Q6P9H4 555 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 NEDD1Q8NHV4 660 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 SNX27Q96L92 541 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 PNMA2Q9UL42 364 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 MTUS1Q9ULD2 1270 aa16.53■□□□□ 0.24
SMURF1-203ENST00000472627 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 ABHD14A-ACY1A0A1B0GW23 586 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 MS4A1P11836 297 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 MCCP23508 829 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 ERVK-21P61565 698 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 NHLH1Q02575 133 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 PDE4DQ08499 809 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 PTGISQ16647 500 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 SCFD2Q8WU76 684 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
SMURF1-203ENST00000472627 RBM47A0AV96 593 aaKnown RBP16.51■□□□□ 0.23
SMURF1-203ENST00000472627 PTPDC1A2A3K4 754 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 A6NJR5 290 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 GJB5O95377 273 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 CHGBP05060 677 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 ICAM1P05362 532 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 SELPP16109 830 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
SMURF1-203ENST00000472627 TMEM63BQ5T3F8 832 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms