RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 RIOK3O14730 519 aaKnown RBP11.13□□□□□ -0.63
VCL-204ENST00000472585 B4GALT4O60513 344 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 CABYRO75952 493 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 CA3P07451 260 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 PSEN1P49768 467 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
VCL-204ENST00000472585 ITGA7Q13683 1181 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 MUM1L1Q5H9M0 696 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 C20orf194Q5TEA3 1177 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 SLFN13Q68D06 897 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.637e-7■□□□□ 11.3
VCL-204ENST00000472585 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 FEM1BQ9UK73 627 aa11.13□□□□□ -0.63
VCL-204ENST00000472585 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 TMEM232C9JQI7 657 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 FOXP2O15409 715 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 RNF113AO15541 343 aaKnown RBP11.12□□□□□ -0.63
VCL-204ENST00000472585 DYNC1LI2O43237 492 aaPredicted RBP11.12□□□□□ -0.63
VCL-204ENST00000472585 GPAA1O43292 621 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 ZEB2O60315 1214 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 HMMRO75330 724 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 ARHGEF15O94989 841 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 OAZ1P54368 228 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 KBTBD3Q8NAB2 608 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 GMCL1P1Q8NEA9 526 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 PPP1R13LQ8WUF5 828 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 ARNTL2Q8WYA1 636 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 DDRGK1Q96HY6 314 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 SCLYQ96I15 445 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 IL17RBQ9NRM6 502 aa11.12□□□□□ -0.63
VCL-204ENST00000472585 EPOPA6NHQ4 379 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 TTLL1O95922 423 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 PFKMP08237 780 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 BMP3P12645 472 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 ACTN1P12814 892 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 MCCP23508 829 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 TTLL4Q14679 1199 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 FSCN1Q16658 493 aaKnown RBP11.11□□□□□ -0.63
VCL-204ENST00000472585 KRT40Q6A162 431 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 EEPD1Q7L9B9 569 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
VCL-204ENST00000472585 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 APPBP2Q92624 585 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 LRRCC1Q9C099 1032 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 AP5M1Q9H0R1 490 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 RNF146Q9NTX7 359 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 FBXO40Q9UH90 709 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 DDX19BQ9UMR2 479 aa11.11□□□□□ -0.63
VCL-204ENST00000472585 PATL2C9JE40 543 aaKnown RBP11.1□□□□□ -0.63
VCL-204ENST00000472585 NMT2O60551 498 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 ALADP13716 330 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 SSTR3P32745 418 aaPredicted RBP11.1□□□□□ -0.63
VCL-204ENST00000472585 TFAP4Q01664 338 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 KCTD1Q719H9 257 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 SPRED2Q7Z698 418 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 DEFB128Q7Z7B8 93 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 TLK2Q86UE8 772 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
VCL-204ENST00000472585 MORC4Q8TE76 937 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 TRERF1Q96PN7 1200 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 SLC9A7Q96T83 725 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 ACAD9Q9H845 621 aa11.1□□□□□ -0.63
VCL-204ENST00000472585 TRMT13Q9NUP7 481 aaKnown RBP11.1□□□□□ -0.63
VCL-204ENST00000472585 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 SUPT20HL2P0C7V6 817 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 CYP2C9P11712 490 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 ALAS1P13196 640 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 IQSEC1Q6DN90 963 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 GJD3Q8N144 294 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
VCL-204ENST00000472585 SLC39A7Q92504 469 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 GMCL1Q96IK5 515 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 ALDH8A1Q9H2A2 487 aaPredicted RBP11.09□□□□□ -0.63
VCL-204ENST00000472585 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
VCL-204ENST00000472585 PLIN4Q96Q06 1357 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 ASB14A6NK59 587 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 PLA2G6O60733 806 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 APPP05067 770 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 TDO2P48775 406 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 NHLH1Q02575 133 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 TAP1Q03518 808 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 GRB10Q13322 594 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 TTBK2Q6IQ55 1244 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 RCSD1Q6JBY9 416 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 FTOQ9C0B1 505 aaKnown RBP eCLIP11.08□□□□□ -0.64
VCL-204ENST00000472585 KCNH6Q9H252 994 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 CD320Q9NPF0 282 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 PRR12Q9ULL5 1215 aa11.08□□□□□ -0.64
VCL-204ENST00000472585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms