RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 TMOD3Q9NYL9 352 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 CNTNAP4Q9C0A0 1308 aa9.2□□□□□ -0.94
SCAF4-205ENST00000472318 ECE1P42892 770 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 FXR1P51114 621 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCAF4-205ENST00000472318 KCT2Q8NC54 265 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 UBE2Q2Q8WVN8 375 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 HRASLS5Q96KN8 279 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 DDX21Q9NR30 783 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCAF4-205ENST00000472318 PICK1Q9NRD5 415 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 TTF2Q9UNY4 1162 aaKnown RBP9.19□□□□□ -0.94
SCAF4-205ENST00000472318 USP42Q9H9J4 1324 aaKnown RBP9.19□□□□□ -0.94
SCAF4-205ENST00000472318 RGPD2P0DJD1 1756 aa9.19□□□□□ -0.94
SCAF4-205ENST00000472318 TMEM265A0A087WTH1 108 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
SCAF4-205ENST00000472318 PAPLNO95428 1278 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 MAP2K2P36507 400 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 MON2Q7Z3U7 1717 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 C2CD5Q86YS7 1000 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 ELMO3Q96BJ8 720 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 ASIC4Q96FT7 647 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 GTF2IRD1Q9UHL9 959 aa9.18□□□□□ -0.94
SCAF4-205ENST00000472318 CA12O43570 354 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 TCF3P15923 654 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 ITIH2P19823 946 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 EIF4BP23588 611 aaKnown RBP9.17□□□□□ -0.94
SCAF4-205ENST00000472318 EPHX2P34913 555 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 PTPN11Q06124 597 aaPredicted RBP9.17□□□□□ -0.94
SCAF4-205ENST00000472318 INPP5AQ14642 412 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 CST9Q5W186 159 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 LRFN4Q6PJG9 635 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 ARMCX6Q7L4S7 300 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 CYFIP1Q7L576 1253 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 ITGB4P16144 1822 aa9.17□□□□□ -0.94
SCAF4-205ENST00000472318 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 ZNF541Q9H0D2 1346 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 CD96P40200 585 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 RRS1Q15050 365 aaKnown RBP9.16□□□□□ -0.94
SCAF4-205ENST00000472318 AOC3Q16853 763 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 TTBK2Q6IQ55 1244 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 SLC12A5Q9H2X9 1139 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 HACL1Q9UJ83 578 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 ADAMTS6Q9UKP5 1117 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 SNX11Q9Y5W9 270 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 ADAMTSL1Q8N6G6 1762 aa9.16□□□□□ -0.94
SCAF4-205ENST00000472318 EDC4Q6P2E9 1401 aaKnown RBP9.15□□□□□ -0.94
SCAF4-205ENST00000472318 SMG6Q86US8 1419 aaKnown RBP9.15□□□□□ -0.94
SCAF4-205ENST00000472318 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 TRAF5O00463 557 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 LRIG2O94898 1065 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 FGD1P98174 961 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 NFIXQ14938 502 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 CIAPIN1Q6FI81 312 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 CDC37L1Q7L3B6 337 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 SPACA3Q8IXA5 215 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 PLPPR2Q96GM1 343 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 TAOK3Q9H2K8 898 aa9.15□□□□□ -0.94
SCAF4-205ENST00000472318 MBNL3Q9NUK0 354 aaKnown RBP9.15□□□□□ -0.94
SCAF4-205ENST00000472318 CASP8AP2Q9UKL3 1982 aa9.15□□□□□ -0.95
SCAF4-205ENST00000472318 RNF123Q5XPI4 1314 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 PRAMEF27A3QJZ7 478 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 H0YIN7 160 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 EOMESO95936 686 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 RNASE1P07998 156 aaKnown RBP9.14□□□□□ -0.95
SCAF4-205ENST00000472318 CRKLP46109 303 aaKnown RBP9.14□□□□□ -0.95
SCAF4-205ENST00000472318 RPS26P62854 115 aaKnown RBP9.14□□□□□ -0.95
SCAF4-205ENST00000472318 HSP90AB2PQ58FF8 381 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 OGFOD2Q6N063 350 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.14□□□□□ -0.95
SCAF4-205ENST00000472318 HDXQ7Z353 690 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
SCAF4-205ENST00000472318 CERS3Q8IU89 383 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 ZNF507Q8TCN5 953 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 AK5Q9Y6K8 562 aa9.14□□□□□ -0.95
SCAF4-205ENST00000472318 A0A1W2PP64 1363 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 SERPINB2P05120 415 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 CAP2P40123 477 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 ANGEL2Q5VTE6 544 aaKnown RBP9.13□□□□□ -0.95
SCAF4-205ENST00000472318 ATG4DQ86TL0 474 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-205ENST00000472318 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-205ENST00000472318 ZNF622Q969S3 477 aaKnown RBP eCLIP9.13□□□□□ -0.951e-11■■■□□ 18.1
SCAF4-205ENST00000472318 FBRSQ9HAH7 460 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 MAPK8IP1Q9UQF2 711 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 COL6A3P12111 3177 aa9.13□□□□□ -0.95
SCAF4-205ENST00000472318 RTL1A6NKG5 1358 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 ANKRD33BA6NCL7 494 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 BIN1O00499 593 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 PHKG2P15735 406 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 SLBPQ14493 270 aaKnown RBP eCLIP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 CCDC85BQ15834 202 aaPredicted RBP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 NKPD1Q17RQ9 610 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 WIPI1Q5MNZ9 446 aaPredicted RBP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 COG3Q96JB2 828 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 DUSP9Q99956 384 aaKnown RBP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 WNT10AQ9GZT5 417 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 RC3H2Q9HBD1 1191 aaKnown RBP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 PRDM5Q9NQX1 630 aaPredicted RBP9.12□□□□□ -0.95
SCAF4-205ENST00000472318 RNF19AQ9NV58 838 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 SNCAIPQ9Y6H5 919 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 CUL9Q8IWT3 2517 aa9.12□□□□□ -0.95
SCAF4-205ENST00000472318 CCDC88AQ3V6T2 1871 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms