RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ADGRF4Q8IZF3 695 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 ZNF654Q8IZM8 581 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 TMEM87BQ96K49 555 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
CLRN1-205ENST00000472224 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
CLRN1-205ENST00000472224 BDP1A6H8Y1 2624 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 KLRF2D3W0D1 207 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 RXRAP19793 462 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 HSPA4P34932 840 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 RTP1P59025 263 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 FGD1P98174 961 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
CLRN1-205ENST00000472224 A1CFQ9NQ94 594 aaKnown RBP13.81□□□□□ -0.2
CLRN1-205ENST00000472224 MAD2L2Q9UI95 211 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
CLRN1-205ENST00000472224 PTPDC1A2A3K4 754 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 NFIBO00712 420 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 DDAH1O94760 285 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 CPA1P15085 419 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 QRICH1Q2TAL8 776 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 ZNF792Q3KQV3 632 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 PIBF1Q8WXW3 757 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 BADQ92934 168 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
CLRN1-205ENST00000472224 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 LRRC37A2A6NM11 1700 aa13.8□□□□□ -0.2
CLRN1-205ENST00000472224 CYBAP13498 195 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 TROAPQ12815 778 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 GRIN2CQ14957 1233 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 PRAMEF19Q5SWL8 479 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 SLC30A10Q6XR72 485 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 DHX32Q7L7V1 743 aaKnown RBP13.79□□□□□ -0.2
CLRN1-205ENST00000472224 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 TRPV1Q8NER1 839 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 MTA3Q9BTC8 594 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 JMJD4Q9H9V9 463 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 PRKAG2Q9UGJ0 569 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 ZHX1Q9UKY1 873 aaPredicted RBP13.79□□□□□ -0.2
CLRN1-205ENST00000472224 PNMA2Q9UL42 364 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 SLC12A7Q9Y666 1083 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 WDR19Q8NEZ3 1342 aa13.79□□□□□ -0.2
CLRN1-205ENST00000472224 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 PALM3A6NDB9 673 aaPredicted RBP13.78□□□□□ -0.2
CLRN1-205ENST00000472224 HMGB1P09429 215 aaKnown RBP13.78□□□□□ -0.2
CLRN1-205ENST00000472224 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
CLRN1-205ENST00000472224 CALML3P27482 149 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 KIF5BP33176 963 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 ANO1Q5XXA6 986 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.78□□□□□ -0.2
CLRN1-205ENST00000472224 FBXO11Q86XK2 927 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 TMTC2Q8N394 836 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 CYP39A1Q9NYL5 469 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 ATP11BQ9Y2G3 1177 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
CLRN1-205ENST00000472224 ABCB11O95342 1321 aa13.78□□□□□ -0.2
CLRN1-205ENST00000472224 DNM1LO00429 736 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 CALM1P0DP23 149 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 CALM2P0DP24 149 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 CALM3P0DP25 149 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 LIFRP42702 1097 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 BAATQ14032 418 aaPredicted RBP13.77□□□□□ -0.21
CLRN1-205ENST00000472224 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 CLEC4DQ8WXI8 215 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 KCNB2Q92953 911 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 FGD4Q96M96 766 aa13.77□□□□□ -0.21
CLRN1-205ENST00000472224 PURBQ96QR8 312 aaKnown RBP13.77□□□□□ -0.21
CLRN1-205ENST00000472224 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
CLRN1-205ENST00000472224 SYNGAP1Q96PV0 1343 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 TRIM43BA6NCK2 446 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 ZBTB5O15062 677 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 PLEKHA8P1O95397 391 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 PSMA5P28066 241 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 EPHB4P54760 987 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 EXOSC10Q01780 885 aaKnown RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 SLC35G1Q2M3R5 365 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 RNF207Q6ZRF8 634 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 FAM133AQ8N9E0 248 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 ADAMTS19Q8TE59 1207 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 PIGSQ96S52 555 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 USP26Q9BXU7 913 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 PRDM5Q9NQX1 630 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 PDLIM7Q9NR12 457 aa13.76□□□□□ -0.21
CLRN1-205ENST00000472224 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
CLRN1-205ENST00000472224 SOWAHBA6NEL2 793 aa13.75□□□□□ -0.21
CLRN1-205ENST00000472224 GOLGA8AA7E2F4 631 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms