RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 SREK1Q8WXA9 508 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 SYMPKQ92797 1274 aaKnown RBP13.55□□□□□ -0.24
IRF1-208ENST00000472045 CCDC114Q96M63 670 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 RNF146Q9NTX7 359 aa13.55□□□□□ -0.24
IRF1-208ENST00000472045 PSMD14O00487 310 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 KARSQ15046 597 aaKnown RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 CCDC122Q5T0U0 273 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 TRERF1Q96PN7 1200 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 ARMCX3Q9UH62 379 aaPredicted RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 RPS12P25398 132 aaKnown RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 COPB2P35606 906 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 SCARF1Q14162 830 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 CCDC14Q49A88 953 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 CCDC127Q96BQ5 260 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 AK8Q96MA6 479 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 IQCGQ9H095 443 aaKnown RBP13.54□□□□□ -0.24
IRF1-208ENST00000472045 MAGEF1Q9HAY2 307 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 TERF1P54274 439 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 FANCCQ00597 558 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 PPP1R9BQ96SB3 815 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 MMP19Q99542 508 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 CTTNBP2NLQ9P2B4 639 aa13.54□□□□□ -0.24
IRF1-208ENST00000472045 USP17L15C9J2P7 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L13C9JLJ4 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L11C9JVI0 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L18D6R9N7 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L22D6RA61 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L17D6RBQ6 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L19D6RCP7 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L20D6RJB6 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 TNPO2O14787 897 aaKnown RBP13.53□□□□□ -0.24
IRF1-208ENST00000472045 ZBTB5O15062 677 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 BRD1O95696 1058 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 PPP1R7Q15435 360 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 TRMT44Q8IYL2 757 aaKnown RBP13.53□□□□□ -0.24
IRF1-208ENST00000472045 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 HESX1Q9UBX0 185 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 FCER1AP12319 257 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 LARP4BQ92615 738 aaKnown RBP13.53□□□□□ -0.24
IRF1-208ENST00000472045 STIM2Q9P246 746 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 TXNDC16Q9P2K2 825 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 MTMR6Q9Y217 621 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 CMA1P23946 247 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 HMGCS2P54868 508 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 AP3B2Q13367 1082 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 NSUN7Q8NE18 718 aaKnown RBP13.53□□□□□ -0.24
IRF1-208ENST00000472045 MARK3P27448 753 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 KIAA1841Q6NSI8 718 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 PRPF38AQ8NAV1 312 aaKnown RBP13.53□□□□□ -0.24
IRF1-208ENST00000472045 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 CLIC6Q96NY7 704 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 CSRNP2Q9H175 543 aa13.53□□□□□ -0.24
IRF1-208ENST00000472045 GNAT1P11488 350 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 GAP43P17677 238 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.24
IRF1-208ENST00000472045 NSUN6Q8TEA1 469 aaKnown RBP13.52□□□□□ -0.24
IRF1-208ENST00000472045 SLC39A2Q9NP94 309 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 FAM169AQ9Y6X4 670 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 STK10O94804 968 aaKnown RBP13.52□□□□□ -0.24
IRF1-208ENST00000472045 GYS1P13807 737 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 ZNF569Q5MCW4 686 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 CTR9Q6PD62 1173 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 GIMAP8Q8ND71 665 aaPredicted RBP13.52□□□□□ -0.24
IRF1-208ENST00000472045 CUEDC2Q9H467 287 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 FAM204AQ9H8W3 233 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 ZNF70Q9UC06 446 aaPredicted RBP13.52□□□□□ -0.24
IRF1-208ENST00000472045 USTQ9Y2C2 406 aa13.52□□□□□ -0.24
IRF1-208ENST00000472045 ABCB11O95342 1321 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 F5H6K3 240 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 MMP1P03956 469 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 FDX1P10109 184 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 TGFB2P61812 414 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 KLRC3Q07444 240 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 IFRD2Q12894 506 aaPredicted RBP13.52□□□□□ -0.25
IRF1-208ENST00000472045 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 GJA10Q969M2 543 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 CAPZA3Q96KX2 299 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 ZBED2Q9BTP6 218 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 FAM49AQ9H0Q0 323 aaPredicted RBP13.52□□□□□ -0.25
IRF1-208ENST00000472045 HAUS2Q9NVX0 235 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 E7EVH7 732 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 SFMBT2Q5VUG0 894 aa13.52□□□□□ -0.25
IRF1-208ENST00000472045 PDCL2Q8N4E4 241 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms