RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 WNT11O96014 354 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 FLCNQ8NFG4 579 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 NLGN2Q8NFZ4 835 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 DIO2Q92813 273 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 ADAMTS10Q9H324 1103 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 SLC52A2Q9HAB3 445 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 TRIM39Q9HCM9 518 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 EBF1Q9UH73 591 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 SFMBT1Q9UHJ3 866 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 ANGEL1Q9UNK9 670 aaKnown RBP5.56□□□□□ -1.52
PTCD3-209ENST00000472044 ASXL2Q76L83 1435 aa5.56□□□□□ -1.52
PTCD3-209ENST00000472044 A0A1W2PQ45 241 aaPredicted RBP5.55□□□□□ -1.52
PTCD3-209ENST00000472044 A0A1W2PQY0 241 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 NAT1P18440 290 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 LRP8Q14114 963 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 NR0B2Q15466 257 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 TM4SF20Q53R12 229 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 RALGPS1Q5JS13 557 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 NIM1KQ8IY84 436 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 IFNL3Q8IZI9 196 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 NAT16Q8N8M0 369 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 ANKS4BQ8N8V4 417 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 AGBL5Q8NDL9 886 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 RCBTB1Q8NDN9 531 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 PDZD8Q8NEN9 1154 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 HHIPL1Q96JK4 782 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 SLAMF8Q9P0V8 285 aa5.55□□□□□ -1.52
PTCD3-209ENST00000472044 C7orf72A4D263 438 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 ANKRD62A6NC57 917 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 MASP1P48740 699 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 GTF2A2P52657 109 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 CORO7P57737 925 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 GPR85P60893 370 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 CHRNEQ04844 493 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 INF2Q27J81 1249 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 RNF187Q5TA31 235 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-209ENST00000472044 KCNT2Q6UVM3 1135 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 SLCO6A1Q86UG4 719 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 CPNE8Q86YQ8 564 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.54□□□□□ -1.52
PTCD3-209ENST00000472044 MFSD3Q96ES6 412 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 SCLYQ96I15 445 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 PHF20Q9BVI0 1012 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 PCMTD2Q9NV79 361 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 MAGEC2Q9UBF1 373 aaPredicted RBP5.54□□□□□ -1.52
PTCD3-209ENST00000472044 NDOR1Q9UHB4 597 aa5.54□□□□□ -1.52
PTCD3-209ENST00000472044 ADAMTS4O75173 837 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 VIL1P09327 827 aaKnown RBP5.53□□□□□ -1.52
PTCD3-209ENST00000472044 NCLP19338 710 aaKnown RBP5.53□□□□□ -1.52
PTCD3-209ENST00000472044 GDNFP39905 211 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 LAPTM5Q13571 262 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 ZMYM1Q5SVZ6 1142 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 MBLAC2Q68D91 279 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 LBX2Q6XYB7 198 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 BRAPQ7Z569 592 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 PI4K2BQ8TCG2 481 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 ASIC4Q96FT7 647 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 MAGEB10Q96LZ2 347 aaPredicted RBP5.53□□□□□ -1.52
PTCD3-209ENST00000472044 SP110Q9HB58 689 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 SPC25Q9HBM1 224 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 C19orf73Q9NVV2 129 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 TRAF6Q9Y4K3 522 aa5.53□□□□□ -1.52
PTCD3-209ENST00000472044 FITM1A5D6W6 292 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 WTIPA6NIX2 430 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 ARVCFO00192 962 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 WNT9AO14904 365 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 HYAL3O43820 417 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 NRDCO43847 1150 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 NPHS1O60500 1241 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 MSCO60682 206 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 DNAJC8O75937 253 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 CRTAMO95727 393 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 HPXP02790 462 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 ASLP04424 464 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 LCP1P13796 627 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 SDSP20132 328 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 POU3F2P20265 443 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 RTP1P59025 263 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 C21orf62-AS1Q17RA5 79 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 KIZQ2M2Z5 673 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 FGD2Q7Z6J4 655 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 TP53INP2Q8IXH6 220 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 Q8N1Y9 231 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 OXR1Q8N573 874 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 BRINP2Q9C0B6 783 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 PRDM7Q9NQW5 492 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 MBNL3Q9NUK0 354 aaKnown RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 ADGRE2Q9UHX3 823 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 ADAMTS6Q9UKP5 1117 aa5.52□□□□□ -1.53
PTCD3-209ENST00000472044 TIMM13Q9Y5L4 95 aaPredicted RBP5.52□□□□□ -1.53
PTCD3-209ENST00000472044 A0A087X0B3 334 aa5.51□□□□□ -1.53
PTCD3-209ENST00000472044 TCRBV16S1A1N1A0A5B0 115 aa5.51□□□□□ -1.53
PTCD3-209ENST00000472044 NOTOA8MTQ0 251 aa5.51□□□□□ -1.53
PTCD3-209ENST00000472044 MYO1BO43795 1136 aa5.51□□□□□ -1.53
PTCD3-209ENST00000472044 DNAJC6O75061 913 aa5.51□□□□□ -1.53
PTCD3-209ENST00000472044 RNASE1P07998 156 aaKnown RBP5.51□□□□□ -1.53
PTCD3-209ENST00000472044 RPL11P62913 178 aaKnown RBP5.51□□□□□ -1.53
PTCD3-209ENST00000472044 LSAMPQ13449 338 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms