RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 HVCN1Q96D96 273 aa11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 CCDC97Q96F63 343 aaPredicted RBP11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 ZIM3Q96PE6 472 aa11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 WDR35Q9P2L0 1181 aa11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 PDE4DIPQ5VU43 2346 aa11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 ZNF831Q5JPB2 1677 aa11.92□□□□□ -0.5
CHMP2B-203ENST00000471660 PTPDC1A2A3K4 754 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ZMYND10O75800 440 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 CTDNEP1O95476 244 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 CCND1P24385 295 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ABL2P42684 1182 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ITGB3BPQ13352 177 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 BYSLQ13895 437 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ACBD5Q5T8D3 534 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 TRIM42Q8IWZ5 723 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 MREGQ8N565 214 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ACRBPQ8NEB7 543 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 KCNMB3Q9NPA1 279 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ZMYM6O95789 1325 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 MAP3K15Q6ZN16 1313 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ANO9A1A5B4 782 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 TRAPPC3O43617 180 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 PAEPP09466 180 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ALDH3A1P30838 453 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 USP4Q13107 963 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 NUGGCQ68CJ6 796 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 HIBCHQ6NVY1 386 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 CACNA2D3Q8IZS8 1091 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 KAZALD1Q96I82 304 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ATP6V1G3Q96LB4 118 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 LZTS2Q9BRK4 669 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 IQCGQ9H095 443 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 HAUS4Q9H6D7 363 aa11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 CWC25Q9NXE8 425 aaPredicted RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 DICER1Q9UPY3 1922 aaKnown RBP11.91□□□□□ -0.5
CHMP2B-203ENST00000471660 ABL1P00519 1130 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 SYKP43405 635 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 CASP7P55210 303 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 RASA3Q14644 834 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 DBN1Q16643 649 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 GNPTABQ3T906 1256 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 APTXQ7Z2E3 356 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MLKLQ8NB16 471 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MYD88Q99836 296 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 OSBPL1AQ9BXW6 950 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 TRIM4Q9C037 500 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MCOLN1Q9GZU1 580 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 G3BP2Q9UN86 482 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 SLC12A4Q9UP95 1085 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 NFE2L3Q9Y4A8 694 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 CLIC4Q9Y696 253 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MROH7-TTC4A0A0A0MT08 1334 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 TJP1Q07157 1748 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MMP10P09238 476 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 MRPS35P82673 323 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 PDE4BQ07343 736 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 DALRD3Q5D0E6 543 aaKnown RBP11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 ZMYM1Q5SVZ6 1142 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 CYP26C1Q6V0L0 522 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 PIM2Q9P1W9 311 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 PHF24Q9UPV7 400 aa11.9□□□□□ -0.5
CHMP2B-203ENST00000471660 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 LRRD1A4D1F6 860 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 STARD3NLO95772 234 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ATP1A1P05023 1023 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ZBED6P86452 979 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 SLC39A6Q13433 755 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 SEPT2Q15019 361 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ZRSR2Q15696 482 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 CWF19L2Q2TBE0 894 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 PPP1R15BQ5SWA1 713 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 MAATS1Q7Z4T9 603 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 AGAP11Q8TF27 550 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 TEKT4Q8WW24 435 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 DNAAF2Q9NVR5 837 aaKnown RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 TAF6LQ9Y6J9 622 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 LAMA4Q16363 1823 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ZNF233A6NK53 670 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 CREB3O43889 395 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 DIAPH2O60879 1101 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 OATP04181 439 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 BMP6P22004 513 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 IL15P40933 162 aaPredicted RBP11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 PPP1R7Q15435 360 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 RINLQ6ZS11 566 aa11.89□□□□□ -0.51
CHMP2B-203ENST00000471660 ARHGEF1Q92888 912 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms