RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 BCRP11274 1271 aa21.99■■□□□ 1.11
PSPC1-203ENST00000471658 C17orf99Q6UX52 265 aa21.99■■□□□ 1.11
PSPC1-203ENST00000471658 NSMFQ6X4W1 530 aa21.99■■□□□ 1.11
PSPC1-203ENST00000471658 REM2Q8IYK8 340 aaPredicted RBP21.99■■□□□ 1.11
PSPC1-203ENST00000471658 REXO1Q8N1G1 1221 aaKnown RBP21.99■■□□□ 1.11
PSPC1-203ENST00000471658 BICD2Q8TD16 824 aa21.99■■□□□ 1.11
PSPC1-203ENST00000471658 ACAD9Q9H845 621 aa21.99■■□□□ 1.11
PSPC1-203ENST00000471658 GCOM1H8Y6P7 765 aaPredicted RBP21.98■■□□□ 1.11
PSPC1-203ENST00000471658 SLC25A27O95847 323 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 POLR2MP0CAP2 368 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 SLC30A10Q6XR72 485 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 PIK3AP1Q6ZUJ8 805 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 FCHSD1Q86WN1 690 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 NOSTRINQ8IVI9 506 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 CHST13Q8NET6 341 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 PURBQ96QR8 312 aaKnown RBP21.98■■□□□ 1.11
PSPC1-203ENST00000471658 TBC1D8O95759 1140 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 HSD17B4P51659 736 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 BAATQ14032 418 aaPredicted RBP21.98■■□□□ 1.11
PSPC1-203ENST00000471658 FAM110CQ1W6H9 321 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 WDR78Q5VTH9 848 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 MCF2L2Q86YR7 1114 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 ZSCAN16Q9H4T2 348 aaPredicted RBP21.98■■□□□ 1.11
PSPC1-203ENST00000471658 A1CFQ9NQ94 594 aaKnown RBP21.98■■□□□ 1.11
PSPC1-203ENST00000471658 COL20A1Q9P218 1284 aa21.98■■□□□ 1.11
PSPC1-203ENST00000471658 PIK3CDO00329 1044 aa21.97■■□□□ 1.11
PSPC1-203ENST00000471658 ALDH1A1P00352 501 aa21.97■■□□□ 1.11
PSPC1-203ENST00000471658 RPS6P62753 249 aaKnown RBP21.97■■□□□ 1.11
PSPC1-203ENST00000471658 RNF207Q6ZRF8 634 aa21.97■■□□□ 1.11
PSPC1-203ENST00000471658 TNPO1Q92973 898 aaKnown RBP21.97■■□□□ 1.11
PSPC1-203ENST00000471658 GLT8D2Q9H1C3 349 aa21.97■■□□□ 1.11
PSPC1-203ENST00000471658 RNF186Q9NXI6 227 aa21.97■■□□□ 1.11
PSPC1-203ENST00000471658 TRPA1O75762 1119 aa21.96■■□□□ 1.11
PSPC1-203ENST00000471658 SYTL5Q8TDW5 730 aaPredicted RBP21.96■■□□□ 1.11
PSPC1-203ENST00000471658 CYP39A1Q9NYL5 469 aa21.96■■□□□ 1.11
PSPC1-203ENST00000471658 CCNA1P78396 465 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 GHRHRQ02643 423 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 BRAPQ7Z569 592 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 SHCBP1Q8NEM2 672 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 FBXO40Q9UH90 709 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 CCDC194A0A1B0GVG4 234 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 WNT7AO00755 349 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 ATP2B1P20020 1258 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 NBR1Q14596 966 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 INF2Q27J81 1249 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 MYSM1Q5VVJ2 828 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 KRT25Q7Z3Z0 450 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 TAAR1Q96RJ0 339 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 MROH8Q9H579 483 aa21.95■■□□□ 1.1
PSPC1-203ENST00000471658 EDIL3O43854 480 aa21.94■■□□□ 1.1
PSPC1-203ENST00000471658 COPB2P35606 906 aa21.94■■□□□ 1.1
PSPC1-203ENST00000471658 TOB1P50616 345 aaPredicted RBP21.94■■□□□ 1.1
PSPC1-203ENST00000471658 TBCKQ8TEA7 893 aa21.94■■□□□ 1.1
PSPC1-203ENST00000471658 ANO3Q9BYT9 981 aa21.94■■□□□ 1.1
PSPC1-203ENST00000471658 FTOQ9C0B1 505 aaKnown RBP eCLIP21.94■■□□□ 1.1
PSPC1-203ENST00000471658 UBXN2AP68543 259 aa21.93■■□□□ 1.1
PSPC1-203ENST00000471658 DNM1Q05193 864 aaKnown RBP21.93■■□□□ 1.1
PSPC1-203ENST00000471658 NONOQ15233 471 aaKnown RBP eCLIP21.93■■□□□ 1.1
PSPC1-203ENST00000471658 CCAR1Q8IX12 1150 aaKnown RBP21.93■■□□□ 1.1
PSPC1-203ENST00000471658 MMP19Q99542 508 aa21.93■■□□□ 1.1
PSPC1-203ENST00000471658 TFIP11Q9UBB9 837 aaKnown RBP21.93■■□□□ 1.1
PSPC1-203ENST00000471658 SPDYE3A6NKU9 549 aa21.92■■□□□ 1.1
PSPC1-203ENST00000471658 CNTN2Q02246 1040 aa21.92■■□□□ 1.1
PSPC1-203ENST00000471658 AP3B2Q13367 1082 aa21.92■■□□□ 1.1
PSPC1-203ENST00000471658 THSD7BQ9C0I4 1608 aa21.92■■□□□ 1.1
PSPC1-203ENST00000471658 FOSP01100 380 aaPredicted RBP21.91■■□□□ 1.1
PSPC1-203ENST00000471658 PGK2P07205 417 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 GPR142Q7Z601 462 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 SAMD3Q8N6K7 520 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 MAP3K20Q9NYL2 800 aaKnown RBP21.91■■□□□ 1.1
PSPC1-203ENST00000471658 FCER1AP12319 257 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 CTGFP29279 349 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 KCTD2Q14681 263 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.91■■□□□ 1.1
PSPC1-203ENST00000471658 DNAJC5GQ8N7S2 189 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 ZFP91Q96JP5 570 aaPredicted RBP21.91■■□□□ 1.1
PSPC1-203ENST00000471658 USP28Q96RU2 1077 aa21.91■■□□□ 1.1
PSPC1-203ENST00000471658 DDX49Q9Y6V7 483 aaKnown RBP21.91■■□□□ 1.1
PSPC1-203ENST00000471658 CEBPZQ03701 1054 aaKnown RBP21.9■■□□□ 1.1
PSPC1-203ENST00000471658 PLEKHH3Q7Z736 793 aa21.9■■□□□ 1.1
PSPC1-203ENST00000471658 PCDHB6Q9Y5E3 794 aa21.9■■□□□ 1.1
PSPC1-203ENST00000471658 CLIC4Q9Y696 253 aa21.9■■□□□ 1.1
PSPC1-203ENST00000471658 PCNTO95613 3336 aa21.9■■□□□ 1.1
PSPC1-203ENST00000471658 PFASO15067 1338 aa21.9■■□□□ 1.1
PSPC1-203ENST00000471658 POTEB2H3BUK9 544 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 EIF2AK2P19525 551 aaKnown RBP21.89■■□□□ 1.09
PSPC1-203ENST00000471658 MAPK4P31152 587 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 ZNF174Q15697 407 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 LETM2Q2VYF4 491 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 MCTP2Q6DN12 878 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 TEX2Q8IWB9 1127 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 IL31RAQ8NI17 732 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 RMDN3Q96TC7 470 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 CFHR5Q9BXR6 569 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 RBBP6Q7Z6E9 1792 aaKnown RBP21.89■■□□□ 1.09
PSPC1-203ENST00000471658 ASTN1O14525 1302 aa21.89■■□□□ 1.09
PSPC1-203ENST00000471658 SOWAHBA6NEL2 793 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 PTPREP23469 700 aa21.88■■□□□ 1.09
PSPC1-203ENST00000471658 SREBF1P36956 1147 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms