RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 FBXO16Q8IX29 292 aaPredicted RBP17.48■□□□□ 0.39
VPS8-221ENST00000471655 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
VPS8-221ENST00000471655 AP5M1Q9H0R1 490 aa17.48■□□□□ 0.39
VPS8-221ENST00000471655 PDGFCQ9NRA1 345 aa17.48■□□□□ 0.39
VPS8-221ENST00000471655 A0A0U1RQG5 324 aaPredicted RBP17.47■□□□□ 0.39
VPS8-221ENST00000471655 B4DLN1 442 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 E7EWF7 191 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 MRPL12P52815 198 aaKnown RBP17.47■□□□□ 0.39
VPS8-221ENST00000471655 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 KIAA1211Q6ZU35 1233 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
VPS8-221ENST00000471655 EEPD1Q7L9B9 569 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 NCOA7Q8NI08 942 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 BADQ92934 168 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 SEZ6LQ9BYH1 1024 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 JMJD4Q9H9V9 463 aa17.47■□□□□ 0.39
VPS8-221ENST00000471655 DDX49Q9Y6V7 483 aaKnown RBP17.47■□□□□ 0.39
VPS8-221ENST00000471655 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 ARVCFO00192 962 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 DYNC1LI2O43237 492 aaPredicted RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 ZEB2O60315 1214 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 PQBP1O60828 265 aaKnown RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 FSCN1Q16658 493 aaKnown RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 QRICH1Q2TAL8 776 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 USH1GQ495M9 461 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 FBXO11Q86XK2 927 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 MCF2L2Q86YR7 1114 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 MTMR8Q96EF0 704 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 TMEM39AQ9NV64 488 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 MAD2L2Q9UI95 211 aa17.46■□□□□ 0.39
VPS8-221ENST00000471655 MRPL11Q9Y3B7 192 aaKnown RBP17.46■□□□□ 0.39
VPS8-221ENST00000471655 SZT2Q5T011 3432 aa17.46■□□□□ 0.38
VPS8-221ENST00000471655 ERICH2A1L162 156 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 KLRF2D3W0D1 207 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
VPS8-221ENST00000471655 BEX3Q00994 111 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 PDE4DQ08499 809 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 SART3Q15020 963 aaKnown RBP17.45■□□□□ 0.38
VPS8-221ENST00000471655 MTA3Q9BTC8 594 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 WDR11Q9BZH6 1224 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 RBM8AQ9Y5S9 174 aaKnown RBP17.45■□□□□ 0.38
VPS8-221ENST00000471655 TAF6LQ9Y6J9 622 aa17.45■□□□□ 0.38
VPS8-221ENST00000471655 NKRFO15226 690 aaKnown RBP eCLIP17.44■□□□□ 0.38
VPS8-221ENST00000471655 RAG1P15918 1043 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 ITGB8P26012 769 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 GHRHRQ02643 423 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 GRM4Q14833 912 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 STOX1Q6ZVD7 989 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 VTI1AQ96AJ9 217 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 AMNQ9BXJ7 453 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 VAT1LQ9HCJ6 419 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 MAP3K20Q9NYL2 800 aaKnown RBP17.44■□□□□ 0.38
VPS8-221ENST00000471655 TBX21Q9UL17 535 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 LAMA3Q16787 3333 aa17.44■□□□□ 0.38
VPS8-221ENST00000471655 ZBTB5O15062 677 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
VPS8-221ENST00000471655 TIMP1P01033 207 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 TROAPQ12815 778 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 TRAF1Q13077 416 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 WTAPQ15007 396 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 SHHQ15465 462 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 BMP2KLQ5H9B9 411 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 TMEM63BQ5T3F8 832 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 CXCL17Q6UXB2 119 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 FAM126BQ8IXS8 530 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 MB21D2Q8IYB1 491 aaPredicted RBP17.43■□□□□ 0.38
VPS8-221ENST00000471655 SAMD3Q8N6K7 520 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 SYTL5Q8TDW5 730 aaPredicted RBP17.43■□□□□ 0.38
VPS8-221ENST00000471655 IGDCC4Q8TDY8 1250 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 NSUN6Q8TEA1 469 aaKnown RBP17.43■□□□□ 0.38
VPS8-221ENST00000471655 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 TBC1D5Q92609 795 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 IWS1Q96ST2 819 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 LSG1Q9H089 658 aaKnown RBP17.43■□□□□ 0.38
VPS8-221ENST00000471655 RIOX1Q9H6W3 641 aa17.43■□□□□ 0.38
VPS8-221ENST00000471655 TLR3O15455 904 aaKnown RBP17.42■□□□□ 0.38
VPS8-221ENST00000471655 CD4P01730 458 aa17.42■□□□□ 0.38
VPS8-221ENST00000471655 ANTXR2P58335 489 aa17.42■□□□□ 0.38
VPS8-221ENST00000471655 MAP3K14Q99558 947 aa17.42■□□□□ 0.38
VPS8-221ENST00000471655 POLR3EQ9NVU0 708 aa17.42■□□□□ 0.38
VPS8-221ENST00000471655 CPT1AP50416 773 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 HSD17B4P51659 736 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 FPGSQ05932 587 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 ITGA7Q13683 1181 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 TMEM67Q5HYA8 995 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 C9orf50Q5SZB4 431 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 FAM109BQ6ICB4 259 aaPredicted RBP17.41■□□□□ 0.38
VPS8-221ENST00000471655 TAAR1Q96RJ0 339 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 SENP2Q9HC62 589 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 COL20A1Q9P218 1284 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 GRIN2DO15399 1336 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 MYH6P13533 1939 aa17.41■□□□□ 0.38
VPS8-221ENST00000471655 OPLAHO14841 1288 aa17.4■□□□□ 0.38
VPS8-221ENST00000471655 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
VPS8-221ENST00000471655 PTGS1P23219 599 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms