RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.2□□□□□ -1.1
HDAC1-204ENST00000471488 VWCEQ96DN2 955 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 SEZ6LQ9BYH1 1024 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 WDR11Q9BZH6 1224 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 ARPP21Q9UBL0 812 aaPredicted RBP8.2□□□□□ -1.1
HDAC1-204ENST00000471488 NOP58Q9Y2X3 529 aaKnown RBP8.2□□□□□ -1.1
HDAC1-204ENST00000471488 RAD50Q92878 1312 aa8.2□□□□□ -1.1
HDAC1-204ENST00000471488 PTPDC1A2A3K4 754 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TSPY3P0CV98 308 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TSPY8P0CW00 308 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 MCCP23508 829 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CALML3P27482 149 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 SLC1A4P43007 532 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 WDR5P61964 334 aaKnown RBP8.19□□□□□ -1.1
HDAC1-204ENST00000471488 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
HDAC1-204ENST00000471488 PTGISQ16647 500 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CCDC96Q2M329 555 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 LEXMQ3ZCV2 418 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 MUM1L1Q5H9M0 696 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TAPT1Q6NXT6 567 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CHST3Q7LGC8 479 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TRMT2AQ8IZ69 625 aaKnown RBP8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 FBXO22Q8NEZ5 403 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 RHPN1Q8TCX5 695 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CEP95Q96GE4 821 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
HDAC1-204ENST00000471488 PHOX2BQ99453 314 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDAC1-204ENST00000471488 SUGCTQ9HAC7 445 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 VTA1Q9NP79 307 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 NYAP2Q9P242 653 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 CCPG1Q9ULG6 757 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 TRANK1O15050 2925 aa8.19□□□□□ -1.1
HDAC1-204ENST00000471488 ATP2A1O14983 1001 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 BAIAP3O94812 1187 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 TTLL1O95922 423 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 OAZ1P54368 228 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 PDE4BQ07343 736 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 PDE4DQ08499 809 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 PPP2R5BQ15173 497 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 DUSP28Q4G0W2 176 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 HSP90AB4PQ58FF6 505 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 ZSCAN25Q6NSZ9 544 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 CEP85Q6P2H3 762 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 HFE2Q6ZVN8 426 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 CHURC1Q8WUH1 139 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 COPS5Q92905 334 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 RAD9AQ99638 391 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 C17orf80Q9BSJ5 609 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 PUS7LQ9H0K6 701 aaKnown RBP8.18□□□□□ -1.1
HDAC1-204ENST00000471488 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 CYP39A1Q9NYL5 469 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 STX8Q9UNK0 236 aa8.18□□□□□ -1.1
HDAC1-204ENST00000471488 LINC01553A4QN01 128 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 GRXCR2A6NFK2 248 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 PITPNM1O00562 1244 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 UPP2O95045 317 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 NKX3-2P78367 333 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 BAATQ14032 418 aaPredicted RBP8.17□□□□□ -1.1
HDAC1-204ENST00000471488 PTPROQ16827 1216 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 FAM160B2Q86V87 743 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 MYOCDQ8IZQ8 938 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 MFSD14AQ96MC6 490 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 ALG1Q9BT22 464 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 ZNF287Q9HBT7 754 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 LMCD1Q9NZU5 365 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 ADD3Q9UEY8 706 aaKnown RBP8.17□□□□□ -1.1
HDAC1-204ENST00000471488 FAM50BQ9Y247 325 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 Q9Y3F1 56 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 MYH4Q9Y623 1939 aa8.17□□□□□ -1.1
HDAC1-204ENST00000471488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 GJB5O95377 273 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 TXNP10599 105 aaKnown RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 SELPP16109 830 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 ALDH5A1P51649 535 aaPredicted RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 TFAP4Q01664 338 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 IKBKEQ14164 716 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 TKFCQ3LXA3 575 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 PUS10Q3MIT2 529 aaKnown RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 TCEAL5Q5H9L2 206 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 NFRKBQ6P4R8 1299 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 CNKSR3Q6P9H4 555 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 LRRC8DQ7L1W4 858 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 RASGRP2Q7LDG7 609 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 STAG1Q8WVM7 1258 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 KIF1BPQ96EK5 621 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 MPHOSPH6Q99547 160 aaKnown RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 UPF3BQ9BZI7 483 aaKnown RBP8.16□□□□□ -1.1
HDAC1-204ENST00000471488 IGFLR1Q9H665 355 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 MTMR4Q9NYA4 1195 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 MUTYHQ9UIF7 546 aa8.16□□□□□ -1.1
HDAC1-204ENST00000471488 ZBED9Q6R2W3 1325 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 SORBS3O60504 671 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 AMHP03971 560 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 FDX1P10109 184 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 SLC16A2P36021 539 aa8.15□□□□□ -1.1
HDAC1-204ENST00000471488 ERVK-21P61565 698 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms