RNA–Protein interactions for RNA: ENST00000471462.2

SUSD3-204, Transcript of sushi domain containing 3, humanhuman

TSL 3

Gene SUSD3, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-204ENST00000471462 BOLA2Q9H3K6 86 aa11.24□□□□□ -0.61
SUSD3-204ENST00000471462 A1CFQ9NQ94 594 aaKnown RBP11.24□□□□□ -0.61
SUSD3-204ENST00000471462 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
SUSD3-204ENST00000471462 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
SUSD3-204ENST00000471462 CTDP1Q9Y5B0 961 aaPredicted RBP11.24□□□□□ -0.61
SUSD3-204ENST00000471462 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
SUSD3-204ENST00000471462 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
SUSD3-204ENST00000471462 TNKSO95271 1327 aa11.24□□□□□ -0.61
SUSD3-204ENST00000471462 MYH7P12883 1935 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
SUSD3-204ENST00000471462 USP34Q70CQ2 3546 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 IGKV6D-41A0A0C4DH26 115 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 CHGBP05060 677 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 MKL1Q969V6 931 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 ACAD9Q9H845 621 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 CLIP2Q9UDT6 1046 aa11.23□□□□□ -0.61
SUSD3-204ENST00000471462 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 ZNF536O15090 1300 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 IQCF3P0C7M6 154 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 ALADP13716 330 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 ATP5JP18859 108 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 PDE4AP27815 886 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 PURAQ00577 322 aaKnown RBP11.22□□□□□ -0.61
SUSD3-204ENST00000471462 LEXMQ3ZCV2 418 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 FBXO16Q8IX29 292 aaPredicted RBP11.22□□□□□ -0.61
SUSD3-204ENST00000471462 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.22□□□□□ -0.61
SUSD3-204ENST00000471462 DDRGK1Q96HY6 314 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 SALL3Q9BXA9 1300 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 KCNH6Q9H252 994 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
SUSD3-204ENST00000471462 ECHDC1Q9NTX5 307 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
SUSD3-204ENST00000471462 BRWD1Q9NSI6 2320 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 BAIAP3O94812 1187 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 FDX1P10109 184 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 MX1P20591 662 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 UBE3CQ15386 1083 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 EEPD1Q7L9B9 569 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 GMCL1P1Q8NEA9 526 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 MORC4Q8TE76 937 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 GDPD5Q8WTR4 605 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 FBXL18Q96ME1 805 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 UIMC1Q96RL1 719 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 FTOQ9C0B1 505 aaKnown RBP eCLIP11.21□□□□□ -0.61
SUSD3-204ENST00000471462 SUGCTQ9HAC7 445 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 RNF146Q9NTX7 359 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 POLR3EQ9NVU0 708 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 PPP4R2Q9NY27 417 aa11.21□□□□□ -0.61
SUSD3-204ENST00000471462 ARPP21Q9UBL0 812 aaPredicted RBP11.21□□□□□ -0.61
SUSD3-204ENST00000471462 SCN5AQ14524 2016 aa11.21□□□□□ -0.62
SUSD3-204ENST00000471462 COL4A4P53420 1690 aaPredicted RBP11.2□□□□□ -0.62
SUSD3-204ENST00000471462 POTEB3A0JP26 581 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 BMP3P12645 472 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 IL9P15248 144 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 SSTR3P32745 418 aaPredicted RBP11.2□□□□□ -0.62
SUSD3-204ENST00000471462 PDE1AP54750 535 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 GPNMBQ14956 572 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 NBPF20Q3BBV1 942 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 TKFCQ3LXA3 575 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 POTEBQ6S5H4 581 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 KIAA1211Q6ZU35 1233 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 TMCO2Q7Z6W1 182 aaPredicted RBP11.2□□□□□ -0.62
SUSD3-204ENST00000471462 PLEKHM2Q8IWE5 1019 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 PI4K2BQ8TCG2 481 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 GPATCH3Q96I76 525 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 TRERF1Q96PN7 1200 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
SUSD3-204ENST00000471462 PUS7LQ9H0K6 701 aaKnown RBP11.2□□□□□ -0.62
SUSD3-204ENST00000471462 MKNK2Q9HBH9 465 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 MTMR4Q9NYA4 1195 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 CYP39A1Q9NYL5 469 aa11.2□□□□□ -0.62
SUSD3-204ENST00000471462 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 TMEM232C9JQI7 657 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 MYL3P08590 195 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 KCNA5P22460 613 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 CPT1AP50416 773 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 ERVK-21P61565 698 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 WDR5P61964 334 aaKnown RBP11.19□□□□□ -0.62
SUSD3-204ENST00000471462 CSPP1Q1MSJ5 1256 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 MUM1L1Q5H9M0 696 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 ERICH6BQ5W0A0 696 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 CENPQQ7L2Z9 268 aaPredicted RBP11.19□□□□□ -0.62
SUSD3-204ENST00000471462 STK11IPQ8N1F8 1099 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 PURBQ96QR8 312 aaKnown RBP11.19□□□□□ -0.62
SUSD3-204ENST00000471462 HAUS7Q99871 368 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 MTG1Q9BT17 334 aaPredicted RBP11.19□□□□□ -0.62
SUSD3-204ENST00000471462 CFAP54Q96N23 3096 aa11.19□□□□□ -0.62
SUSD3-204ENST00000471462 TTC41PQ6P2S7 1318 aa11.18□□□□□ -0.62
SUSD3-204ENST00000471462 RBM47A0AV96 593 aaKnown RBP11.18□□□□□ -0.62
SUSD3-204ENST00000471462 GSG1L2A8MUP6 293 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms