RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PAGR1Q9BTK6 254 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 GOLPH3LQ9H4A5 285 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 TXNRD2Q9NNW7 524 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 SYNPO2Q9UMS6 1093 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 MYH4Q9Y623 1939 aa19.95■□□□□ 0.78
HSPG2-208ENST00000471322 CTGFP29279 349 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 MARCKSP29966 332 aaPredicted RBP19.94■□□□□ 0.78
HSPG2-208ENST00000471322 LACTBP83111 547 aaPredicted RBP19.94■□□□□ 0.78
HSPG2-208ENST00000471322 ZNF543Q08ER8 600 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 SLC35G1Q2M3R5 365 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 HEATR3Q7Z4Q2 680 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 BLIDQ8IZY5 108 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 FBXO28Q9NVF7 368 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 FLOT1O75955 427 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 CAMK4Q16566 473 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 WWC2Q6AWC2 1192 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 FMR1NBQ8N0W7 255 aaPredicted RBP19.94■□□□□ 0.78
HSPG2-208ENST00000471322 FUCA2Q9BTY2 467 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 TRIM17Q9Y577 477 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 ZSWIM8A7E2V4 1837 aa19.94■□□□□ 0.78
HSPG2-208ENST00000471322 FAM237AA0A1B0GTK4 181 aa19.93■□□□□ 0.78
HSPG2-208ENST00000471322 STXBP3O00186 592 aa19.93■□□□□ 0.78
HSPG2-208ENST00000471322 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
HSPG2-208ENST00000471322 DCAF4Q8WV16 495 aa19.93■□□□□ 0.78
HSPG2-208ENST00000471322 ERO1AQ96HE7 468 aa19.93■□□□□ 0.78
HSPG2-208ENST00000471322 A0A1B0GVL5 298 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 SPDYE16A6NNV3 312 aaPredicted RBP19.92■□□□□ 0.78
HSPG2-208ENST00000471322 WDR46O15213 610 aaKnown RBP19.92■□□□□ 0.78
HSPG2-208ENST00000471322 GNA11P29992 359 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 UVSSAQ2YD98 709 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 SLFN13Q68D06 897 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
HSPG2-208ENST00000471322 RBPJLQ9UBG7 517 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 PCDHB6Q9Y5E3 794 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 MYH6P13533 1939 aa19.92■□□□□ 0.78
HSPG2-208ENST00000471322 PTPREP23469 700 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 PSMC4P43686 418 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 GCLCP48506 637 aaPredicted RBP19.91■□□□□ 0.78
HSPG2-208ENST00000471322 NDUFA8P51970 172 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 COG2Q14746 738 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 Q3C1V9 767 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 SASS6Q6UVJ0 657 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 CTU1Q7Z7A3 348 aaKnown RBP19.91■□□□□ 0.78
HSPG2-208ENST00000471322 TNS4Q8IZW8 715 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 TRIM47Q96LD4 638 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 TIGD1Q96MW7 591 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 ZMYND12Q9H0C1 365 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 EFCC1Q9HA90 598 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 C6orf50Q9HD87 102 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 SRPRBQ9Y5M8 271 aaKnown RBP19.91■□□□□ 0.78
HSPG2-208ENST00000471322 CAVIN2O95810 425 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 NAPAP54920 295 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 KIF22Q14807 665 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 FAM110CQ1W6H9 321 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 RESP18Q5W5W9 173 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 OTOP1Q7RTM1 612 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 GMCL1P1Q8NEA9 526 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 ATG4CQ96DT6 458 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 MCOLN1Q9GZU1 580 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 UBA5Q9GZZ9 404 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 VAT1LQ9HCJ6 419 aa19.91■□□□□ 0.78
HSPG2-208ENST00000471322 FRMPD2Q68DX3 1309 aaPredicted RBP19.9■□□□□ 0.78
HSPG2-208ENST00000471322 ESYT2A0FGR8 921 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 PFKFB1P16118 471 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 ATP2B1P20020 1258 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 CCDC96Q2M329 555 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 TTC38Q5R3I4 469 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 KCTD1Q719H9 257 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 HOMER1Q86YM7 354 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 FERMT2Q96AC1 680 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 PIGSQ96S52 555 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 SDF4Q9BRK5 362 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 GPCPD1Q9NPB8 672 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 FAM13BQ9NYF5 915 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 BTBD7Q9P203 1132 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 HPSEQ9Y251 543 aa19.9■□□□□ 0.78
HSPG2-208ENST00000471322 PNMA6FA0A0J9YX94 578 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 CCDC194A0A1B0GVG4 234 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 M0R2N6 131 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 ZNF202O95125 648 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 SLC1A4P43007 532 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 TYRO3Q06418 890 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 EARS2Q5JPH6 523 aaKnown RBP19.89■□□□□ 0.77
HSPG2-208ENST00000471322 PPP1R18Q6NYC8 613 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 PIK3AP1Q6ZUJ8 805 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 CKAP2LQ8IYA6 745 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 GPRC5AQ8NFJ5 357 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 PANK2Q9BZ23 570 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 HOXC10Q9NYD6 342 aa19.89■□□□□ 0.77
HSPG2-208ENST00000471322 FBXO2Q9UK22 296 aaPredicted RBP19.89■□□□□ 0.77
HSPG2-208ENST00000471322 CNMDO75829 334 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 DSG3P32926 999 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 SYKP43405 635 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 ERVK-9P63128 1117 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 ERVK-24P63145 666 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 TYW1BQ6NUM6 668 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 SHC4Q6S5L8 630 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 KRT25Q7Z3Z0 450 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 KIFC2Q96AC6 838 aa19.88■□□□□ 0.77
HSPG2-208ENST00000471322 GMCL1Q96IK5 515 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms