RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 AK8Q96MA6 479 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 SDF4Q9BRK5 362 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 TMEM60Q9H2L4 133 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 RPAP3Q9H6T3 665 aaPredicted RBP10.65□□□□□ -0.7
VPS52-216ENST00000471309 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 USP25Q9UHP3 1055 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 PPP1R9AQ9ULJ8 1098 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 MRPL11Q9Y3B7 192 aaKnown RBP10.65□□□□□ -0.7
VPS52-216ENST00000471309 AFG3L2Q9Y4W6 797 aa10.65□□□□□ -0.7
VPS52-216ENST00000471309 SPDYE3A6NKU9 549 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 POTECB2RU33 542 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 FLOT1O75955 427 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 TDP2O95551 362 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 CAVIN2O95810 425 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 SREBF1P36956 1147 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 TXLNAP40222 546 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 USP11P51784 963 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 GHRHRQ02643 423 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 DGKZQ13574 1117 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 STX1AQ16623 288 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 LONRF3Q496Y0 759 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 KANK3Q6NY19 840 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 USP49Q70CQ1 688 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 LDHDQ86WU2 507 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 POTEDQ86YR6 584 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 ZNF784Q8NCA9 323 aaPredicted RBP10.64□□□□□ -0.71
VPS52-216ENST00000471309 CNNM3Q8NE01 707 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 CCDC34Q96HJ3 373 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 MBOAT7Q96N66 472 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 HOOK1Q9UJC3 728 aaKnown RBP10.64□□□□□ -0.71
VPS52-216ENST00000471309 CSADQ9Y600 493 aa10.64□□□□□ -0.71
VPS52-216ENST00000471309 MYPNQ86TC9 1320 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 CYP3A7-CYP3A51PA0A087WV96 503 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 POLR2DO15514 142 aaKnown RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 ACTN4O43707 911 aaKnown RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 SLC37A4O43826 429 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 EDIL3O43854 480 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 TAL1P17542 331 aaPredicted RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 CYP3A7P24462 503 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 FXR2P51116 673 aaKnown RBP eCLIP10.63□□□□□ -0.71
VPS52-216ENST00000471309 HMGCS2P54868 508 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 PRKG1Q13976 671 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 CALCRLQ16602 461 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 EAPPQ56P03 285 aaPredicted RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 DLK2Q6UY11 383 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 ANKRD13AQ8IZ07 590 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 EPSTI1Q96J88 318 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 MTMR9Q96QG7 549 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 P2RX7Q99572 595 aaKnown RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 TMOD4Q9NZQ9 345 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 KIAA1468Q9P260 1216 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 DDX25Q9UHL0 483 aaKnown RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 TUBE1Q9UJT0 475 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
VPS52-216ENST00000471309 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
VPS52-216ENST00000471309 A0A087X0B3 334 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 GCOM1H8Y6P7 765 aaPredicted RBP10.62□□□□□ -0.71
VPS52-216ENST00000471309 ZBED4O75132 1171 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 CYP3A4P08684 503 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 SLFN14P0C7P3 912 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 HSD17B4P51659 736 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 OAZ1P54368 228 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 ARHGAP4P98171 946 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 PPATQ06203 517 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 E2F4Q16254 413 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 TMEM266Q2M3C6 531 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 UVSSAQ2YD98 709 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 ANO6Q4KMQ2 910 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 ERO1BQ86YB8 467 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 SAMD3Q8N6K7 520 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 PDILTQ8N807 584 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 IGSF22Q8N9C0 903 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 RNF214Q8ND24 703 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 CCSER1Q9C0I3 900 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 EHMT1Q9H9B1 1298 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 SERTAD1Q9UHV2 236 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 ADAMTS5Q9UNA0 930 aa10.62□□□□□ -0.71
VPS52-216ENST00000471309 UNCXA6NJT0 531 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 VWA5AO00534 786 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 ATP2A1O14983 1001 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 CFBP00751 764 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 HOXA13P31271 388 aaPredicted RBP10.61□□□□□ -0.71
VPS52-216ENST00000471309 DSG3P32926 999 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 CIITAP33076 1130 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 COG2Q14746 738 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 POSTNQ15063 836 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 ZRSR1Q15695 479 aaKnown RBP10.61□□□□□ -0.71
VPS52-216ENST00000471309 Q4G0T1 1027 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 SAMD1Q6SPF0 538 aaPredicted RBP10.61□□□□□ -0.71
VPS52-216ENST00000471309 CATSPERGQ6ZRH7 1159 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 SH3RF1Q7Z6J0 888 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 CEP57L1Q8IYX8 460 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 IQUBQ8NA54 791 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 REPS2Q8NFH8 660 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 DHX58Q96C10 678 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 ATG4CQ96DT6 458 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms