RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 FOXQ1Q9C009 403 aa7.69□□□□□ -1.18
GPNMB-208ENST00000470994 PRDM5Q9NQX1 630 aaPredicted RBP7.69□□□□□ -1.18
GPNMB-208ENST00000470994 VEGFAP15692 232 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-208ENST00000470994 ARNTP27540 789 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 PDE6BP35913 854 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 FSTL1Q12841 308 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 NKPD1Q17RQ9 610 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 MAP1SQ66K74 1059 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-208ENST00000470994 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 DNAJC5GQ8N7S2 189 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 BRIP1Q9BX63 1249 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 MAPK8IP1Q9UQF2 711 aa7.68□□□□□ -1.18
GPNMB-208ENST00000470994 MAP2P11137 1827 aaKnown RBP7.68□□□□□ -1.18
GPNMB-208ENST00000470994 COL24A1Q17RW2 1714 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 ITGB4P16144 1822 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 GLTPD2A6NH11 291 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 TMEM253P0C7T8 217 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 C1QTNF9P0C862 333 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 GDNFP39905 211 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 IL6STP40189 918 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-208ENST00000470994 FCGRTP55899 365 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 ST5P78524 1137 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 DCTN1Q14203 1278 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 PRR5LQ6MZQ0 368 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 TTLL10Q6ZVT0 673 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 CDC37L1Q7L3B6 337 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 MCM10Q7L590 875 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 NBPF5PQ86XG9 351 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-208ENST00000470994 NGEFQ8N5V2 710 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 CNBD1Q8NA66 436 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 KCT2Q8NC54 265 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 CARS2Q9HA77 564 aaKnown RBP7.67□□□□□ -1.18
GPNMB-208ENST00000470994 USP16Q9Y5T5 823 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
GPNMB-208ENST00000470994 UBR3Q6ZT12 1888 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 PRAMEF22A3QJZ6 481 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 CAMTA2O94983 1202 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 SNRPA1P09661 255 aaKnown RBP7.66□□□□□ -1.18
GPNMB-208ENST00000470994 NME2P22392 152 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 PRELPP51888 382 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 NPAS4Q8IUM7 802 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 NSUN3Q9H649 340 aaKnown RBP7.66□□□□□ -1.18
GPNMB-208ENST00000470994 MIS18AQ9NYP9 233 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 KCPQ6ZWJ8 1503 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 TAF1LQ8IZX4 1826 aa7.66□□□□□ -1.18
GPNMB-208ENST00000470994 FAM155AB1AL88 458 aaPredicted RBP7.65□□□□□ -1.18
GPNMB-208ENST00000470994 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 CIAPIN1Q6FI81 312 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 CARMIL3Q8ND23 1372 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 GPBAR1Q8TDU6 330 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 DIRC2Q96SL1 478 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 TAOK3Q9H2K8 898 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 CBX8Q9HC52 389 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 SAMM50Q9Y512 469 aa7.65□□□□□ -1.18
GPNMB-208ENST00000470994 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 FANCGO15287 622 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 DDNO94850 711 aaPredicted RBP7.64□□□□□ -1.19
GPNMB-208ENST00000470994 RAC2P15153 192 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 ECM1Q16610 540 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 TPTE2Q6XPS3 522 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 MASTLQ96GX5 879 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 EPB41L4BQ9H329 900 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 NIP7Q9Y221 180 aaKnown RBP eCLIP7.64□□□□□ -1.19
GPNMB-208ENST00000470994 ZNF652Q9Y2D9 606 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 UTRNP46939 3433 aa7.64□□□□□ -1.19
GPNMB-208ENST00000470994 NPC1L1Q9UHC9 1359 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 TCAF2A6NFQ2 919 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 SRGNP10124 158 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 ARHGAP4P98171 946 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 TAF7Q15545 349 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-208ENST00000470994 PPM1JQ5JR12 505 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 STYK1Q6J9G0 422 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 DMRTB1Q96MA1 342 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 CSRNP1Q96S65 589 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 NIF3L1Q9GZT8 377 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 DCP1AQ9NPI6 582 aaPredicted RBP7.63□□□□□ -1.19
GPNMB-208ENST00000470994 RRP7AQ9Y3A4 280 aaKnown RBP7.63□□□□□ -1.19
GPNMB-208ENST00000470994 ANKRD26Q9UPS8 1709 aa7.63□□□□□ -1.19
GPNMB-208ENST00000470994 NPR1P16066 1061 aa7.62□□□□□ -1.19
GPNMB-208ENST00000470994 KCNA10Q16322 511 aa7.62□□□□□ -1.19
GPNMB-208ENST00000470994 EAPPQ56P03 285 aaPredicted RBP7.62□□□□□ -1.19
GPNMB-208ENST00000470994 CLEC4GQ6UXB4 293 aa7.62□□□□□ -1.19
GPNMB-208ENST00000470994 MFSD4AQ8N468 514 aa7.62□□□□□ -1.19
GPNMB-208ENST00000470994 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
GPNMB-208ENST00000470994 AKAP2Q9Y2D5 859 aa7.62□□□□□ -1.19
GPNMB-208ENST00000470994 N4BP2Q86UW6 1770 aaPredicted RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 MYH14Q7Z406 1995 aaKnown RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 TCERG1O14776 1098 aaKnown RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 GPR182O15218 404 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 HTATSF1O43719 755 aaKnown RBP7.61□□□□□ -1.19
GPNMB-208ENST00000470994 EOMESO95936 686 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 KRT1P04264 644 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 MYL6BP14649 208 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 ZNF252P-AS1Q0IIN9 211 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 HLFQ16534 295 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
GPNMB-208ENST00000470994 OLFM4Q6UX06 510 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms