RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 MAF1Q9H063 256 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 ACAD9Q9H845 621 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 RABGAP1Q9Y3P9 1069 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 CLIC4Q9Y696 253 aa11.12□□□□□ -0.63
CCM2-204ENST00000470837 ZNF536O15090 1300 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 BTBD19C9JJ37 291 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 SLC10A3P09131 477 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 GCFC2P16383 781 aaKnown RBP11.11□□□□□ -0.63
CCM2-204ENST00000470837 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
CCM2-204ENST00000470837 MCM7P33993 719 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 ZNF76P36508 570 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 UBE2HP62256 183 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 GRM1Q13255 1194 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 ORC2Q13416 577 aaPredicted RBP11.11□□□□□ -0.63
CCM2-204ENST00000470837 SLC39A14Q15043 492 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 ZNF174Q15697 407 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 GPAT2Q6NUI2 795 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 RNF207Q6ZRF8 634 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 NCAPG2Q86XI2 1143 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 TMEM87AQ8NBN3 555 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 LINC00301Q8NCQ3 95 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 BRI3BPQ8WY22 251 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 CHAMP1Q96JM3 812 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 SPATC1LQ9H0A9 340 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
CCM2-204ENST00000470837 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
CCM2-204ENST00000470837 LAD1O00515 517 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 MEIS2O14770 477 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 NEMFO60524 1076 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 PPP6R2O75170 966 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 USP11P51784 963 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 MOGSQ13724 837 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 EARS2Q5JPH6 523 aaKnown RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 WDR78Q5VTH9 848 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 RIOX2Q8IUF8 465 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 KRI1Q8N9T8 703 aaKnown RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 REPS2Q8NFH8 660 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 GPRC5AQ8NFJ5 357 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 MPHOSPH6Q99547 160 aaKnown RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 FTOQ9C0B1 505 aaKnown RBP eCLIP11.1□□□□□ -0.63
CCM2-204ENST00000470837 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 ZNF214Q9UL59 606 aaPredicted RBP11.1□□□□□ -0.63
CCM2-204ENST00000470837 PCDHB6Q9Y5E3 794 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
CCM2-204ENST00000470837 PFASO15067 1338 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 FAM205CA6NFA0 338 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 B4DLN1 442 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 NFIBO00712 420 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 CYP2C8P10632 490 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 TAL1P17542 331 aaPredicted RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 MARCKSP29966 332 aaPredicted RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 TOB1P50616 345 aaPredicted RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 HSD17B4P51659 736 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 APLP1P51693 650 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 ARHGAP4P98171 946 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 TMEM266Q2M3C6 531 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 CCDC73Q6ZRK6 1079 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 CLEC4DQ8WXI8 215 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 SYAP1Q96A49 352 aaPredicted RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 FERMT2Q96AC1 680 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 PGBD1Q96JS3 809 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 MROH8Q9H579 483 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.09□□□□□ -0.63
CCM2-204ENST00000470837 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 LMBRD1Q9NUN5 540 aa11.09□□□□□ -0.63
CCM2-204ENST00000470837 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 TRAK2O60296 914 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 CUTAO60888 179 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 SREBF1P36956 1147 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 TXLNAP40222 546 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 RPS6P62753 249 aaKnown RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 ERVK-9P63128 1117 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 ERVK-24P63145 666 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 NOGQ13253 232 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 PTGDRQ13258 359 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 BAATQ14032 418 aaPredicted RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 KCTD2Q14681 263 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 TAF1CQ15572 869 aaPredicted RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 CALCRLQ16602 461 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 DEFB115Q30KQ5 88 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 PPP4R3AQ6IN85 833 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 DTHD1Q6ZMT9 781 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 REM2Q8IYK8 340 aaPredicted RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 FAM43AQ8N2R8 423 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 RAB34Q9BZG1 259 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 FAM13BQ9NYF5 915 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 BTBD7Q9P203 1132 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 DDX25Q9UHL0 483 aaKnown RBP11.08□□□□□ -0.64
CCM2-204ENST00000470837 RIPK3Q9Y572 518 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
CCM2-204ENST00000470837 OPLAHO14841 1288 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms