RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 QRICH1Q2TAL8 776 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 USH1GQ495M9 461 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 MUM1L1Q5H9M0 696 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 SCFD2Q8WU76 684 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 CLEC4DQ8WXI8 215 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 CUL5Q93034 780 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 GLT1D1Q96MS3 346 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 LY9Q9HBG7 655 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 PHF24Q9UPV7 400 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 ELP1O95163 1332 aa12.6□□□□□ -0.39
RFTN1-208ENST00000470458 SOWAHBA6NEL2 793 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
RFTN1-208ENST00000470458 SH2B2O14492 632 aaPredicted RBP12.59□□□□□ -0.39
RFTN1-208ENST00000470458 STAM2O75886 525 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
RFTN1-208ENST00000470458 POLR2MP0CAP2 368 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 HSPA4P34932 840 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 GJA9P57773 515 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 SNAP25P60880 206 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 CNTN2Q02246 1040 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 GHRHRQ02643 423 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 TTLL4Q14679 1199 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 STXBP2Q15833 593 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 BLOC1S2Q6QNY1 142 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 STOX1Q6ZVD7 989 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 FBXL16Q8N461 479 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 FANCBQ8NB91 859 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 KCNB2Q92953 911 aa12.59□□□□□ -0.39
RFTN1-208ENST00000470458 H0YGN5 161 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 hCG_1984214I3L0E3 225 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 NFIBO00712 420 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 C6orf222P0C671 652 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 CPT1AP50416 773 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 GNASQ5JWF2 1037 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 GJC2Q5T442 439 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 ARHGEF16Q5VV41 709 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 XRRA1Q6P2D8 792 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 CHST3Q7LGC8 479 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 ZNF713Q8N859 430 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 TOX2Q96NM4 488 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 RMDN3Q96TC7 470 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 LBHD1Q9BQE6 289 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 UPF3AQ9H1J1 476 aaKnown RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 EHMT1Q9H9B1 1298 aa12.58□□□□□ -0.4
RFTN1-208ENST00000470458 GPHNQ9NQX3 736 aaPredicted RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 BAZ2BQ9UIF8 2168 aaKnown RBP12.58□□□□□ -0.4
RFTN1-208ENST00000470458 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
RFTN1-208ENST00000470458 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 ZBTB43O43298 467 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 CFBP00751 764 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 TGFB3P10600 412 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 HSD17B4P51659 736 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 ACLYP53396 1101 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 ANTXR2P58335 489 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 DUSP28Q4G0W2 176 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 SLC39A5Q6ZMH5 540 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 KLHDC9Q8NEP7 349 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 DIS3LQ8TF46 1054 aaKnown RBP12.57□□□□□ -0.4
RFTN1-208ENST00000470458 VTI1AQ96AJ9 217 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 WDR11Q9BZH6 1224 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 STARD7Q9NQZ5 370 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 CEP290O15078 2479 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 SYNRGQ9UMZ2 1314 aa12.57□□□□□ -0.4
RFTN1-208ENST00000470458 TLR3O15455 904 aaKnown RBP12.56□□□□□ -0.4
RFTN1-208ENST00000470458 ADAMTS4O75173 837 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 PGK1P00558 417 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 TAL1P17542 331 aaPredicted RBP12.56□□□□□ -0.4
RFTN1-208ENST00000470458 EDNRBP24530 442 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 BMP8BP34820 402 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 ADCYAP1R1P41586 468 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 EXOSC10Q01780 885 aaKnown RBP12.56□□□□□ -0.4
RFTN1-208ENST00000470458 SNX17Q15036 470 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 GNPTABQ3T906 1256 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 RASGRP2Q7LDG7 609 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 IL27Q8NEV9 243 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 SYTL5Q8TDW5 730 aaPredicted RBP12.56□□□□□ -0.4
RFTN1-208ENST00000470458 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
RFTN1-208ENST00000470458 FGD4Q96M96 766 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 TM6SF1Q9BZW5 370 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
RFTN1-208ENST00000470458 A0A0U1RQG5 324 aaPredicted RBP12.55□□□□□ -0.4
RFTN1-208ENST00000470458 PIK3CDO00329 1044 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 ANAPC15P60006 121 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 AKAP17AQ02040 695 aaKnown RBP12.55□□□□□ -0.4
RFTN1-208ENST00000470458 KCNA10Q16322 511 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 FSCN1Q16658 493 aaKnown RBP12.55□□□□□ -0.4
RFTN1-208ENST00000470458 RTN1Q16799 776 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 CPLX2Q6PUV4 134 aaKnown RBP12.55□□□□□ -0.4
RFTN1-208ENST00000470458 TLK2Q86UE8 772 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 C7orf61Q8IZ16 206 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 SMARCC2Q8TAQ2 1214 aa12.55□□□□□ -0.4
RFTN1-208ENST00000470458 JAKMIP1Q96N16 626 aaKnown RBP12.55□□□□□ -0.4
RFTN1-208ENST00000470458 PIGSQ96S52 555 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms