RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 CNNM2Q9H8M5 875 aa36.69■■■■□ 3.46
HMG20B-209ENST00000470356 STXBP5LQ9Y2K9 1186 aa36.69■■■■□ 3.46
HMG20B-209ENST00000470356 CALML3P27482 149 aa36.68■■■■□ 3.46
HMG20B-209ENST00000470356 EPHB4P54760 987 aa36.68■■■■□ 3.46
HMG20B-209ENST00000470356 CXCL17Q6UXB2 119 aa36.68■■■■□ 3.46
HMG20B-209ENST00000470356 SLC30A10Q6XR72 485 aa36.68■■■■□ 3.46
HMG20B-209ENST00000470356 UBA5Q9GZZ9 404 aa36.68■■■■□ 3.46
HMG20B-209ENST00000470356 FAM126BQ8IXS8 530 aa36.67■■■■□ 3.46
HMG20B-209ENST00000470356 CPVLQ9H3G5 476 aa36.67■■■■□ 3.46
HMG20B-209ENST00000470356 ZEB2O60315 1214 aa36.66■■■■□ 3.46
HMG20B-209ENST00000470356 PTGS1P23219 599 aa36.66■■■■□ 3.46
HMG20B-209ENST00000470356 RPS6P62753 249 aaKnown RBP36.66■■■■□ 3.46
HMG20B-209ENST00000470356 DUSP28Q4G0W2 176 aa36.66■■■■□ 3.46
HMG20B-209ENST00000470356 ASPRV1Q53RT3 343 aa36.66■■■■□ 3.46
HMG20B-209ENST00000470356 TMEM63BQ5T3F8 832 aa36.66■■■■□ 3.46
HMG20B-209ENST00000470356 TNKSO95271 1327 aa36.65■■■■□ 3.46
HMG20B-209ENST00000470356 SLC43A3Q8NBI5 491 aa36.65■■■■□ 3.46
HMG20B-209ENST00000470356 RGS22Q8NE09 1264 aa36.65■■■■□ 3.46
HMG20B-209ENST00000470356 RAD50Q92878 1312 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 MYH6P13533 1939 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 RBM47A0AV96 593 aaKnown RBP36.64■■■■□ 3.46
HMG20B-209ENST00000470356 TLR3O15455 904 aaKnown RBP36.64■■■■□ 3.46
HMG20B-209ENST00000470356 SMAD3P84022 425 aaKnown RBP36.64■■■■□ 3.46
HMG20B-209ENST00000470356 MFSD5Q6N075 450 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 DNERQ8NFT8 737 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 UBAC1Q9BSL1 405 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 SEZ6LQ9BYH1 1024 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 MAF1Q9H063 256 aa36.64■■■■□ 3.46
HMG20B-209ENST00000470356 USH1GQ495M9 461 aa36.63■■■■□ 3.45
HMG20B-209ENST00000470356 ADGRF4Q8IZF3 695 aa36.63■■■■□ 3.45
HMG20B-209ENST00000470356 SLC17A8Q8NDX2 589 aa36.63■■■■□ 3.45
HMG20B-209ENST00000470356 RNPC3Q96LT9 517 aaKnown RBP36.63■■■■□ 3.45
HMG20B-209ENST00000470356 MPHOSPH6Q99547 160 aaKnown RBP36.63■■■■□ 3.45
HMG20B-209ENST00000470356 WDR11Q9BZH6 1224 aa36.63■■■■□ 3.45
HMG20B-209ENST00000470356 CD4P01730 458 aa36.62■■■■□ 3.45
HMG20B-209ENST00000470356 CDC37Q16543 378 aaPredicted RBP36.62■■■■□ 3.45
HMG20B-209ENST00000470356 PARP1P09874 1014 aaKnown RBP36.61■■■■□ 3.45
HMG20B-209ENST00000470356 EDNRBP24530 442 aa36.61■■■■□ 3.45
HMG20B-209ENST00000470356 IRX6P78412 446 aaPredicted RBP36.61■■■■□ 3.45
HMG20B-209ENST00000470356 PDE4DQ08499 809 aa36.61■■■■□ 3.45
HMG20B-209ENST00000470356 ITGA7Q13683 1181 aa36.61■■■■□ 3.45
HMG20B-209ENST00000470356 ZNF697Q5TEC3 545 aa36.61■■■■□ 3.45
HMG20B-209ENST00000470356 RUFY2Q8WXA3 655 aa36.61■■■■□ 3.45
HMG20B-209ENST00000470356 GRIN2DO15399 1336 aa36.6■■■■□ 3.45
HMG20B-209ENST00000470356 GUCD1Q96NT3 240 aa36.6■■■■□ 3.45
HMG20B-209ENST00000470356 ABCB11O95342 1321 aa36.59■■■■□ 3.45
HMG20B-209ENST00000470356 B4DLN1 442 aa36.59■■■■□ 3.45
HMG20B-209ENST00000470356 CHMLP26374 656 aa36.59■■■■□ 3.45
HMG20B-209ENST00000470356 MRPL12P52815 198 aaKnown RBP36.59■■■■□ 3.45
HMG20B-209ENST00000470356 IFIT1BQ5T764 474 aaKnown RBP36.58■■■■□ 3.45
HMG20B-209ENST00000470356 FAM161BQ96MY7 647 aa36.58■■■■□ 3.45
HMG20B-209ENST00000470356 PPIGQ13427 754 aaKnown RBP eCLIP36.57■■■■□ 3.447e-9■■■□□ 15.6
HMG20B-209ENST00000470356 SEC23AQ15436 765 aa36.57■■■■□ 3.44
HMG20B-209ENST00000470356 TMEM199Q8N511 208 aa36.57■■■■□ 3.44
HMG20B-209ENST00000470356 JMJD4Q9H9V9 463 aa36.57■■■■□ 3.44
HMG20B-209ENST00000470356 QRICH1Q2TAL8 776 aa36.56■■■■□ 3.44
HMG20B-209ENST00000470356 SCFD2Q8WU76 684 aa36.56■■■■□ 3.44
HMG20B-209ENST00000470356 U3KPZ7 1027 aaPredicted RBP36.56■■■■□ 3.44
HMG20B-209ENST00000470356 A0A0C4DFX4 3053 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 NKRFO15226 690 aaKnown RBP eCLIP36.55■■■■□ 3.44
HMG20B-209ENST00000470356 CPT1AP50416 773 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 PTH1RQ03431 593 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 TRDNQ13061 729 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 CYB5R4Q7L1T6 521 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 TBC1D5Q92609 795 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 BUD13Q9BRD0 619 aaKnown RBP eCLIP36.55■■■■□ 3.447e-8■■□□□ 11.7
HMG20B-209ENST00000470356 PPP1R12CQ9BZL4 782 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 SEMA6BQ9H3T3 888 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 VAT1LQ9HCJ6 419 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 POLR3EQ9NVU0 708 aa36.55■■■■□ 3.44
HMG20B-209ENST00000470356 DHX16O60231 1041 aaKnown RBP36.54■■■■□ 3.44
HMG20B-209ENST00000470356 CSF2RAP15509 400 aa36.54■■■■□ 3.44
HMG20B-209ENST00000470356 PSMC6P62333 389 aa36.54■■■■□ 3.44
HMG20B-209ENST00000470356 C16orf59Q7L2K0 433 aa36.54■■■■□ 3.44
HMG20B-209ENST00000470356 FBXO11Q86XK2 927 aa36.54■■■■□ 3.44
HMG20B-209ENST00000470356 MCF2L2Q86YR7 1114 aa36.54■■■■□ 3.44
HMG20B-209ENST00000470356 PPP2R5BQ15173 497 aa36.53■■■■□ 3.44
HMG20B-209ENST00000470356 OR6J1Q8NGC5 347 aa36.53■■■■□ 3.44
HMG20B-209ENST00000470356 MRPL11Q9Y3B7 192 aaKnown RBP36.53■■■■□ 3.44
HMG20B-209ENST00000470356 CYP21A2P08686 494 aa36.52■■■■□ 3.44
HMG20B-209ENST00000470356 CYP2C18P33260 490 aa36.52■■■■□ 3.44
HMG20B-209ENST00000470356 STAG2Q8N3U4 1231 aa36.52■■■■□ 3.44
HMG20B-209ENST00000470356 SYTL5Q8TDW5 730 aaPredicted RBP36.52■■■■□ 3.44
HMG20B-209ENST00000470356 TRPV6Q9H1D0 765 aa36.52■■■■□ 3.44
HMG20B-209ENST00000470356 HSFX4A0A1B0GTS1 333 aaPredicted RBP36.51■■■■□ 3.44
HMG20B-209ENST00000470356 HSFX3A0A1B0GWH4 333 aaPredicted RBP36.51■■■■□ 3.44
HMG20B-209ENST00000470356 PURAQ00577 322 aaKnown RBP36.51■■■■□ 3.44
HMG20B-209ENST00000470356 BRDTQ58F21 947 aaPredicted RBP36.51■■■■□ 3.44
HMG20B-209ENST00000470356 TMEM240Q5SV17 173 aa36.51■■■■□ 3.44
HMG20B-209ENST00000470356 NSUN6Q8TEA1 469 aaKnown RBP36.51■■■■□ 3.44
HMG20B-209ENST00000470356 HIPK3Q9H422 1215 aa36.51■■■■□ 3.44
HMG20B-209ENST00000470356 CUL9Q8IWT3 2517 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 KLRF2D3W0D1 207 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 SGSM2O43147 1006 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 B4GALT4O60513 344 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 TAAR1Q96RJ0 339 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 TTYH1Q9H313 450 aaPredicted RBP36.5■■■■□ 3.43
HMG20B-209ENST00000470356 COL20A1Q9P218 1284 aa36.5■■■■□ 3.43
HMG20B-209ENST00000470356 BAZ2BQ9UIF8 2168 aaKnown RBP36.5■■■■□ 3.43
HMG20B-209ENST00000470356 SCN10AQ9Y5Y9 1956 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms