RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SBK1Q52WX2 424 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 IQSEC1Q6DN90 963 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 KCTD1Q719H9 257 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCDC171-204ENST00000470191 TMCO2Q7Z6W1 182 aaPredicted RBP10.87□□□□□ -0.67
CCDC171-204ENST00000470191 ALYREFQ86V81 257 aaKnown RBP10.87□□□□□ -0.67
CCDC171-204ENST00000470191 STRBPQ96SI9 672 aaKnown RBP10.87□□□□□ -0.67
CCDC171-204ENST00000470191 MTMR4Q9NYA4 1195 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 MTUS1Q9ULD2 1270 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 COG5Q9UP83 839 aa10.87□□□□□ -0.67
CCDC171-204ENST00000470191 IGKV6D-41A0A0C4DH26 115 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 SMARCA5O60264 1052 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-204ENST00000470191 TTLL1O95922 423 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 MCCP23508 829 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 STAT2P52630 851 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 OAZ1P54368 228 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 GRB10Q13322 594 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 RASGRP2Q7LDG7 609 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 TET1Q8NFU7 2136 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 GDPD5Q8WTR4 605 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 UIMC1Q96RL1 719 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 EPB41L4AQ9HCS5 686 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-204ENST00000470191 C11orf16Q9NQ32 467 aa10.86□□□□□ -0.67
CCDC171-204ENST00000470191 GPHNQ9NQX3 736 aaPredicted RBP10.86□□□□□ -0.67
CCDC171-204ENST00000470191 ZNF536O15090 1300 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 NCOR1O75376 2440 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 KIF28PB7ZC32 967 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 RAB11FIP3O75154 756 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 HMMRO75330 724 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 SUPT20HL2P0C7V6 817 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 NBPF20Q3BBV1 942 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 HERC6Q8IVU3 1022 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
CCDC171-204ENST00000470191 RETREG2Q8NC44 543 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 GMCL1P1Q8NEA9 526 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 OR6J1Q8NGC5 347 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 OSBP2Q969R2 916 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 SLC9A7Q96T83 725 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 ZBED2Q9BTP6 218 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 WDR11Q9BZH6 1224 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 CD320Q9NPF0 282 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 CYP39A1Q9NYL5 469 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 SIP14410 1827 aa10.85□□□□□ -0.67
CCDC171-204ENST00000470191 LCHNA4D1U4 455 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 M0R2C6 588 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 PFKMP08237 780 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-204ENST00000470191 SLC1A4P43007 532 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 KCNJ6P48051 423 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 PURAQ00577 322 aaKnown RBP10.84□□□□□ -0.67
CCDC171-204ENST00000470191 TFAP4Q01664 338 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 FAM160B2Q86V87 743 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 STAG1Q8WVM7 1258 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 MTG1Q9BT17 334 aaPredicted RBP10.84□□□□□ -0.67
CCDC171-204ENST00000470191 SEZ6LQ9BYH1 1024 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 VTA1Q9NP79 307 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 NOD1Q9Y239 953 aa10.84□□□□□ -0.67
CCDC171-204ENST00000470191 PTPDC1A2A3K4 754 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 GPAA1O43292 621 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 GPR37L1O60883 481 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 IQCF3P0C7M6 154 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 FDX1P10109 184 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-204ENST00000470191 CPT1AP50416 773 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 BAATQ14032 418 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-204ENST00000470191 CCDC96Q2M329 555 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 TKFCQ3LXA3 575 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 DUSP28Q4G0W2 176 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 TSHZ3Q63HK5 1081 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 FAM117BQ6P1L5 589 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 RPAP2Q8IXW5 612 aaPredicted RBP10.83□□□□□ -0.68
CCDC171-204ENST00000470191 COPS5Q92905 334 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 ZNF287Q9HBT7 754 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 PRR12Q9ULL5 1215 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 Q9Y3F1 56 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 SCN10AQ9Y5Y9 1956 aa10.83□□□□□ -0.68
CCDC171-204ENST00000470191 NMT2O60551 498 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 LPXNO60711 386 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 CALML3P27482 149 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 RFC2P35250 354 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 SLC16A2P36021 539 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
CCDC171-204ENST00000470191 DEFB103AP81534 67 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 HNRNPUQ00839 825 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC171-204ENST00000470191 PDE4BQ07343 736 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 GIMAP6Q6P9H5 292 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 NEDD1Q8NHV4 660 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 APPBP2Q92624 585 aa10.82□□□□□ -0.68
CCDC171-204ENST00000470191 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms