RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 F8W031 263 aaPredicted RBP8.78□□□□□ -1
COL11A1-208ENST00000470170 SMAD7O15105 426 aaKnown RBP8.78□□□□□ -1
COL11A1-208ENST00000470170 TRIM13O60858 407 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 VMACQ2NL98 169 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 LILRA6Q6PI73 481 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 APBA2Q99767 749 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 RXFP1Q9HBX9 757 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 EMC9Q9Y3B6 208 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 CCDC9Q9Y3X0 531 aaKnown RBP8.78□□□□□ -1
COL11A1-208ENST00000470170 IRS2Q9Y4H2 1338 aa8.78□□□□□ -1
COL11A1-208ENST00000470170 GLI4P10075 376 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 PAMP19021 973 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 PRR5P85299 388 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 BVESQ8NE79 360 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 PPP1R14AQ96A00 147 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 ZCCHC4Q9H5U6 513 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 PARD6AQ9NPB6 346 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 GULP1Q9UBP9 304 aa8.77□□□□□ -1.01
COL11A1-208ENST00000470170 DBR1Q9UK59 544 aaKnown RBP8.77□□□□□ -1.01
COL11A1-208ENST00000470170 NPHP3-ACAD11A0A0J9YXS1 232 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 PPP1R11O60927 126 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-208ENST00000470170 SSBP05455 408 aaKnown RBP eCLIP8.76□□□□□ -1.01
COL11A1-208ENST00000470170 TCF3P15923 654 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 HOXA5P20719 270 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 IGFBP6P24592 240 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-208ENST00000470170 LIMS1P48059 325 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 SCRN1Q12765 414 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 NCAPHQ15003 741 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 C6orf15Q6UXA7 325 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-208ENST00000470170 LZTR1Q8N653 840 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 PWWP2AQ96N64 755 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 KCNC2Q96PR1 638 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 GPRC5CQ9NQ84 441 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 CLEC1BQ9P126 229 aa8.76□□□□□ -1.01
COL11A1-208ENST00000470170 FBLN1P23142 703 aa8.75□□□□□ -1.01
COL11A1-208ENST00000470170 LARP1BQ659C4 914 aaKnown RBP8.75□□□□□ -1.01
COL11A1-208ENST00000470170 MARCH10Q8NA82 808 aaPredicted RBP8.75□□□□□ -1.01
COL11A1-208ENST00000470170 ACTR10Q9NZ32 417 aa8.75□□□□□ -1.01
COL11A1-208ENST00000470170 RAPGEFL1Q9UHV5 662 aa8.75□□□□□ -1.01
COL11A1-208ENST00000470170 B2RBV5 119 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 NOP56O00567 594 aaKnown RBP8.74□□□□□ -1.01
COL11A1-208ENST00000470170 NAT2P11245 290 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 PFKLP17858 780 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 ZNF143P52747 638 aaPredicted RBP8.74□□□□□ -1.01
COL11A1-208ENST00000470170 MBLAC2Q68D91 279 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 POMZP3Q6PJE2 187 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 CABP7Q86V35 215 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 VPS37DQ86XT2 251 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 CRACR2BQ8N4Y2 399 aaPredicted RBP8.74□□□□□ -1.01
COL11A1-208ENST00000470170 COPS5Q92905 334 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 C20orf173Q96LM9 149 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 MTA3Q9BTC8 594 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 BCAS3Q9H6U6 928 aa8.74□□□□□ -1.01
COL11A1-208ENST00000470170 C7orf72A4D263 438 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 PLS3P13797 630 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 ETFBP38117 255 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 GTF2IRD2BQ6EKJ0 949 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 GTF2IRD2Q86UP8 949 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 TRIM59Q8IWR1 403 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 ADAMTS20P59510 1910 aa8.73□□□□□ -1.01
COL11A1-208ENST00000470170 TRBV23OR9-2A0A075B6M9 112 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 ATF2P15336 505 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 MC3RP41968 323 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 CTSWP56202 376 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 TARBP2Q15633 366 aaKnown RBP8.72□□□□□ -1.01
COL11A1-208ENST00000470170 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 FAM178BQ8IXR5 827 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 MRGPRX3Q96LB0 322 aa8.72□□□□□ -1.01
COL11A1-208ENST00000470170 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL11A1-208ENST00000470170 TBX1O43435 398 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 NPHS1O60500 1241 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 THBDP07204 575 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 GNL2Q13823 731 aaKnown RBP8.71□□□□□ -1.02
COL11A1-208ENST00000470170 USP33Q8TEY7 942 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 ALG3Q92685 438 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 PRKAG3Q9UGI9 489 aa8.71□□□□□ -1.02
COL11A1-208ENST00000470170 A0A0G2JLL6 359 aaPredicted RBP8.7□□□□□ -1.02
COL11A1-208ENST00000470170 ASGR2P07307 311 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 CYP4F3Q08477 520 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 NETO2Q8NC67 525 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 MICAL1Q8TDZ2 1067 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 BTN2A2Q8WVV5 523 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 TINF2Q9BSI4 451 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 NKX2-4Q9H2Z4 354 aa8.7□□□□□ -1.02
COL11A1-208ENST00000470170 DDAH1O94760 285 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 FUCA1P04066 466 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 FGRP09769 529 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 PMLP29590 882 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 FOXO4P98177 505 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 INF2Q27J81 1249 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 SV2CQ496J9 727 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 WWC2Q6AWC2 1192 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 MRM1Q6IN84 353 aaKnown RBP8.69□□□□□ -1.02
COL11A1-208ENST00000470170 LINC01356Q8N9X3 169 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 SYT8Q8NBV8 401 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 FEZF2Q8TBJ5 459 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 TSPAN17Q96FV3 270 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 MMP19Q99542 508 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 RNF38Q9H0F5 515 aa8.69□□□□□ -1.02
COL11A1-208ENST00000470170 ZNF408Q9H9D4 720 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms