RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 BTBD11A6QL63 1104 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 RASA4BC9J798 803 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 H0YC42 278 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 CASQ2O14958 399 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 MCF2LO15068 1137 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 SPINT1O43278 529 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 NMT2O60551 498 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 TSPAN1O60635 241 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 BPNT1O95861 308 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 MYL3P08590 195 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 HSPA8P11142 646 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ALOX15P16050 662 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 PRKAR2BP31323 418 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 GPC1P35052 558 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF76P36508 570 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 GNL1P36915 607 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 UBA7P41226 1012 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 PHKA2P46019 1235 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 MXI1P50539 228 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 RNF144AP50876 292 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 TPD52P55327 224 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 GEMIN4P57678 1058 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 AP2B1P63010 937 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 TPM4P67936 248 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 BASP1P80723 227 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 TAGLNQ01995 201 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 DMPKQ09013 629 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 INAQ16352 499 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 PKN2Q16513 984 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 WDR44Q5JSH3 913 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 GNASQ5JWF2 1037 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ODR4Q5SWX8 454 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 NUGGCQ68CJ6 796 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 CCDC129Q6ZRS4 1044 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ARHGEF18Q6ZSZ5 1173 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 RUFY3Q7L099 469 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 FBXO33Q7Z6M2 555 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 IQCA1Q86XH1 822 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 GAS2L3Q86XJ1 694 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ETFBKMTQ8IXQ9 262 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ABTB2Q8N961 1025 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 USP38Q8NB14 1042 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 SPC24Q8NBT2 197 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 RASSF8Q8NHQ8 419 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 SPATA18Q8TC71 538 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 EPS8L3Q8TE67 593 aaKnown RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 WHAMMQ8TF30 809 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 DPF3Q92784 378 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 CUL5Q93034 780 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 SDCCAG3Q96C92 435 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 FRMD6Q96NE9 622 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ALPK1Q96QP1 1244 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 HERC2P3Q9BVR0 1158 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 STK31Q9BXU1 1019 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 RBCK1Q9BYM8 510 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 TRIM8Q9BZR9 551 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ZNF700Q9H0M5 742 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 BHMT2Q9H2M3 363 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 ARNT2Q9HBZ2 717 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 IL1RAPL1Q9NZN1 696 aa5.73□□□□□ -1.49
COL3A1-205ENST00000470167 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.73□□□□□ -1.49
COL3A1-205ENST00000470167 AATKQ6ZMQ8 1374 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 TARSL2A2RTX5 802 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 M0R2C6 588 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CYTH3O43739 400 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 SNX2O60749 519 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 KCNJ13O60928 360 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 DNAJC6O75061 913 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ADAMTS4O75173 837 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 PAHP00439 452 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 PCP11498 1178 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 GLULP15104 373 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 RPS2P15880 293 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 DESP17661 470 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ATP5DP30049 168 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CDC27P30260 824 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CTCFP49711 727 aaPredicted RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 RCAN1P53805 252 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 GABREP78334 506 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CDK17Q00537 523 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 TUBA3CQ13748 450 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 LBRQ14739 615 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 USH1GQ495M9 461 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ZC3H12BQ5HYM0 836 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 C6orf118Q5T5N4 469 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ADALQ6DHV7 355 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 LLGL2Q6P1M3 1020 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 ABRAXAS1Q6UWZ7 409 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 RTL10Q7L3V2 364 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 DGLUCYQ7Z3D6 616 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 HOOK3Q86VS8 718 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 TRIML2Q8N7C3 387 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CTNNBL1Q8WYA6 563 aaPredicted RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 CDKL2Q92772 493 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 TSR2Q969E8 191 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 TCF12Q99081 682 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 UQCC2Q9BRT2 126 aa5.72□□□□□ -1.49
COL3A1-205ENST00000470167 SRRTQ9BXP5 876 aaKnown RBP5.72□□□□□ -1.49
COL3A1-205ENST00000470167 OXCT2Q9BYC2 517 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms