RNA–Protein interactions for RNA: ENST00000468704.1

TMEM50A-202, Transcript of transmembrane protein 50A, humanhuman

TSL 3

Gene TMEM50A, Length 799 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-202ENST00000468704 DDX49Q9Y6V7 483 aaKnown RBP20.03■□□□□ 0.8
TMEM50A-202ENST00000468704 B4DLN1 442 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 MRPL12P52815 198 aaKnown RBP20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 ANTXR2P58335 489 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 NKX3-2P78367 333 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 MDM2Q00987 491 aaPredicted RBP20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 TMEM67Q5HYA8 995 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 IQSEC1Q6DN90 963 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 CASC1Q6TDU7 716 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 CHST3Q7LGC8 479 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 GLT1D1Q96MS3 346 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 PRDM5Q9NQX1 630 aaPredicted RBP20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 PDLIM7Q9NR12 457 aa20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 GNEQ9Y223 722 aaKnown RBP20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 MRPL11Q9Y3B7 192 aaKnown RBP20.02■□□□□ 0.8
TMEM50A-202ENST00000468704 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 PALM3A6NDB9 673 aaPredicted RBP20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 ASGR1P07306 291 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 PDE4DQ08499 809 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 GNASQ5JWF2 1037 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 TAPT1Q6NXT6 567 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 CATIPQ7Z7H3 387 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 MCF2L2Q86YR7 1114 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 TDHQ8IZJ6 230 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 MTA3Q9BTC8 594 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 AMNQ9BXJ7 453 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 SENP2Q9HC62 589 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 VAT1LQ9HCJ6 419 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 PDGFCQ9NRA1 345 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 ELP1O95163 1332 aa20.01■□□□□ 0.79
TMEM50A-202ENST00000468704 SLC27A2O14975 620 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 CTAGE5O15320 804 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 CDC45O75419 566 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 SMPD1P17405 629 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 EDNRBP24530 442 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 IRX5P78411 483 aaPredicted RBP20■□□□□ 0.79
TMEM50A-202ENST00000468704 TLE2Q04725 743 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 MTMR8Q96EF0 704 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 PCDH10Q9P2E7 1040 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 Q9Y3F1 56 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 MROH7Q68CQ1 1323 aa20■□□□□ 0.79
TMEM50A-202ENST00000468704 ZBTB5O15062 677 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 PQBP1O60828 265 aaKnown RBP19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 NEFLP07196 543 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 CLTBP09497 229 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 MCM5P33992 734 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 TROAPQ12815 778 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 FSCN1Q16658 493 aaKnown RBP19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 IGDCC4Q8TDY8 1250 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 LAMA3Q16787 3333 aa19.99■□□□□ 0.79
TMEM50A-202ENST00000468704 A0A0U1RQG5 324 aaPredicted RBP19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 PRC1O43663 620 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 DDAH1O94760 285 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 BEX3Q00994 111 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 TRAF1Q13077 416 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 NECTIN1Q15223 517 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 DUSP28Q4G0W2 176 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 RNF20Q5VTR2 975 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 ANKRD33Q7Z3H0 272 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 TMEM87BQ96K49 555 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 TOX2Q96NM4 488 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 LY9Q9HBG7 655 aa19.98■□□□□ 0.79
TMEM50A-202ENST00000468704 RBM47A0AV96 593 aaKnown RBP19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 DCDC2CA8MYV0 355 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 DYNC1LI2O43237 492 aaPredicted RBP19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 ZEB2O60315 1214 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 PPP2R5BQ15173 497 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 ZNF654Q8IZM8 581 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 SYTL5Q8TDW5 730 aaPredicted RBP19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 SCFD2Q8WU76 684 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 VTI1AQ96AJ9 217 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 MAP3K14Q99558 947 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 WDR11Q9BZH6 1224 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 RIOX1Q9H6W3 641 aa19.97■□□□□ 0.79
TMEM50A-202ENST00000468704 SH2B2O14492 632 aaPredicted RBP19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 PPP1R11O60927 126 aaPredicted RBP19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 CABYRO75952 493 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 KIF5BP33176 963 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 GHRHRQ02643 423 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 SH3RF1Q7Z6J0 888 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 CTCFLQ8NI51 663 aaPredicted RBP19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 NSUN6Q8TEA1 469 aaKnown RBP19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 COL20A1Q9P218 1284 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 PCDHA1Q9Y5I3 950 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 DOCK5Q9H7D0 1870 aa19.96■□□□□ 0.79
TMEM50A-202ENST00000468704 TRIM43BA6NCK2 446 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 KIAA0355O15063 1070 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 NKRFO15226 690 aaKnown RBP eCLIP19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 CFBP00751 764 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 PTGS1P23219 599 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 HSD17B4P51659 736 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 SLC35G1Q2M3R5 365 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 LRIT3Q3SXY7 679 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 CXCL17Q6UXB2 119 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 NFXL1Q6ZNB6 911 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
TMEM50A-202ENST00000468704 TBC1D5Q92609 795 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms