RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 FBXL18Q96ME1 805 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 ALG1Q9BT22 464 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 PHF20Q9BVI0 1012 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM8Q9BZR9 551 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 LUC7LQ9NQ29 371 aaKnown RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 GPRC5CQ9NQ84 441 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 CHST7Q9NS84 486 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 APOBEC2Q9Y235 224 aaKnown RBP4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 SPEF1Q9Y4P9 236 aa4.84□□□□□ -1.63
HMGB1P25-201ENST00000468402 SCRIBQ14160 1630 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 ZNF891A8MT65 544 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 H0Y8X5 98 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 STXBP3O00186 592 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 MEFVO15553 781 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 SLITRK5O94991 958 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 SNUPNO95149 360 aaKnown RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 FKBP9O95302 570 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 CBX7O95931 251 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 CAPNS1P04632 268 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 NFICP08651 508 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 GLB1P16278 677 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 TXKP42681 527 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 SEPHS1P49903 392 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 DNM2P50570 870 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 UBE4AQ14139 1066 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 GRIK4Q16099 956 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 ABCB5Q2M3G0 1257 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 ATP13A4Q4VNC1 1196 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 SLC35F1Q5T1Q4 408 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 SYCP2LQ5T4T6 812 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 STYK1Q6J9G0 422 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 IGF2-ASQ6U949 168 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 FKBP9P1Q75LS8 142 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 TMC3Q7Z5M5 1100 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 JPH3Q8WXH2 748 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 CDH19Q9H159 772 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRDM10Q9NQV6 1147 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 THG1LQ9NWX6 298 aaKnown RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 KCNH3Q9ULD8 1083 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 MINPP1Q9UNW1 487 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 LUC7L2Q9Y383 392 aaKnown RBP4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 COMMD10Q9Y6G5 202 aa4.83□□□□□ -1.64
HMGB1P25-201ENST00000468402 C2orf71A6NGG8 1288 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 GABRDO14764 452 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 GLRX3O76003 335 aaKnown RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 FBXO21O94952 628 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 ALX3O95076 343 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 TIAF1O95411 115 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 THBDP07204 575 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 BPIP17213 487 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 NOP2P46087 812 aaKnown RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 ST5P78524 1137 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 OCRLQ01968 901 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 TCIRG1Q13488 830 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 COL9A3Q14050 684 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 SAFB2Q14151 953 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 GFOD2Q3B7J2 385 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 NKAPLQ5M9Q1 402 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 PNMA8AQ86V59 439 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 TOP6BLQ8N6T0 577 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 FBLIM1Q8WUP2 373 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 VWCEQ96DN2 955 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 GSX1Q9H4S2 264 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 ARNT2Q9HBZ2 717 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 PCMTD2Q9NV79 361 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 COQ6Q9Y2Z9 468 aa4.82□□□□□ -1.64
HMGB1P25-201ENST00000468402 TNKSO95271 1327 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 WDR64B1ANS9 1081 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 C9orf172C9J069 976 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 CBX4O00257 560 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 SIGLEC6O43699 453 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRKD3O94806 890 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 PRAMEF1O95521 474 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 MT-CO1P00395 513 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 F2P00734 622 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 SCG5P05408 212 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 YBX3P16989 372 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 HOXB4P17483 251 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 KPNA1P52294 538 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 GPR85P60893 370 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 PAK1Q13153 545 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 NMIQ13287 307 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 CDK5R2Q13319 367 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 HLTFQ14527 1009 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 FAM47CQ5HY64 1035 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 FAM102BQ5T8I3 360 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 DENND5AQ6IQ26 1287 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 CDPF1Q6NVV7 123 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 ABHD17CQ6PCB6 329 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 PGM2L1Q6PCE3 622 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 ANKLE2Q86XL3 938 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 KIF18BQ86Y91 864 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 KSR1Q8IVT5 923 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 GIMAP7Q8NHV1 300 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 AHCYL2Q96HN2 611 aaKnown RBP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 CHAMP1Q96JM3 812 aa4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 RTFDC1Q9BY42 306 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P25-201ENST00000468402 CEP41Q9BYV8 373 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms