RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 MOXD2PA6NHM9 499 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 SLC27A2O14975 620 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 C6orf222P0C671 652 aaPredicted RBP19.92■□□□□ 0.78
SSBP1-207ENST00000468267 NKX3-2P78367 333 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 GRM4Q14833 912 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 NECTIN1Q15223 517 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 TRIM60Q495X7 471 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 TMEM67Q5HYA8 995 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 IQSEC1Q6DN90 963 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 EEPD1Q7L9B9 569 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 FBXO11Q86XK2 927 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 MTMR8Q96EF0 704 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 PDGFCQ9NRA1 345 aa19.92■□□□□ 0.78
SSBP1-207ENST00000468267 GNEQ9Y223 722 aaKnown RBP19.92■□□□□ 0.78
SSBP1-207ENST00000468267 CTAGE5O15320 804 aa19.91■□□□□ 0.78
SSBP1-207ENST00000468267 IRX5P78411 483 aaPredicted RBP19.91■□□□□ 0.78
SSBP1-207ENST00000468267 TROAPQ12815 778 aa19.91■□□□□ 0.78
SSBP1-207ENST00000468267 CREB3L3Q68CJ9 461 aa19.91■□□□□ 0.78
SSBP1-207ENST00000468267 NOL8Q76FK4 1167 aaKnown RBP19.91■□□□□ 0.78
SSBP1-207ENST00000468267 FBXO16Q8IX29 292 aaPredicted RBP19.91■□□□□ 0.78
SSBP1-207ENST00000468267 PCSK9Q8NBP7 692 aaKnown RBP19.91■□□□□ 0.78
SSBP1-207ENST00000468267 DNERQ8NFT8 737 aa19.91■□□□□ 0.78
SSBP1-207ENST00000468267 NUP133Q8WUM0 1156 aa19.91■□□□□ 0.78
SSBP1-207ENST00000468267 MRPL11Q9Y3B7 192 aaKnown RBP19.91■□□□□ 0.78
SSBP1-207ENST00000468267 SMPD1P17405 629 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 TLE2Q04725 743 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 GNASQ5JWF2 1037 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 CATIPQ7Z7H3 387 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 MCF2L2Q86YR7 1114 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 TBC1D5Q92609 795 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 MTA3Q9BTC8 594 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 PCDH10Q9P2E7 1040 aa19.9■□□□□ 0.78
SSBP1-207ENST00000468267 PRC1O43663 620 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 CDC45O75419 566 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 ASGR1P07306 291 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 EDNRBP24530 442 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 MCM5P33992 734 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 MDM2Q00987 491 aaPredicted RBP19.89■□□□□ 0.77
SSBP1-207ENST00000468267 SLC35G1Q2M3R5 365 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 CASC1Q6TDU7 716 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 MPHOSPH6Q99547 160 aaKnown RBP19.89■□□□□ 0.77
SSBP1-207ENST00000468267 AMNQ9BXJ7 453 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 RIOX1Q9H6W3 641 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 LY9Q9HBG7 655 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 STARD7Q9NQZ5 370 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 PRKAG2Q9UGJ0 569 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 Q9Y3F1 56 aa19.89■□□□□ 0.77
SSBP1-207ENST00000468267 ELP1O95163 1332 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 RBM47A0AV96 593 aaKnown RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 B4DLN1 442 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 ZBTB5O15062 677 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 DYNC1LI2O43237 492 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 MRPL12P52815 198 aaKnown RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 PDE4DQ08499 809 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 TMEM63BQ5T3F8 832 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 TLK2Q86UE8 772 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 SYTL5Q8TDW5 730 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 LBHD1Q9BQE6 289 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 UBE2OQ9C0C9 1292 aaKnown RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 AP5M1Q9H0R1 490 aa19.88■□□□□ 0.77
SSBP1-207ENST00000468267 GPHNQ9NQX3 736 aaPredicted RBP19.88■□□□□ 0.77
SSBP1-207ENST00000468267 PPP1R11O60927 126 aaPredicted RBP19.87■□□□□ 0.77
SSBP1-207ENST00000468267 NEFLP07196 543 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 BEX3Q00994 111 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 COL9A3Q14050 684 aaPredicted RBP19.87■□□□□ 0.77
SSBP1-207ENST00000468267 FSCN1Q16658 493 aaKnown RBP19.87■□□□□ 0.77
SSBP1-207ENST00000468267 DUSP28Q4G0W2 176 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 TMTC2Q8N394 836 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 TMEM87BQ96K49 555 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 GLT1D1Q96MS3 346 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 MAP3K14Q99558 947 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 WDR11Q9BZH6 1224 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 LTBP2Q14767 1821 aa19.87■□□□□ 0.77
SSBP1-207ENST00000468267 OPLAHO14841 1288 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 CYTH3O43739 400 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 PTGS1P23219 599 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 RNF20Q5VTR2 975 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 ANKRD33Q7Z3H0 272 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 SH3RF1Q7Z6J0 888 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 ZNF654Q8IZM8 581 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 VTI1AQ96AJ9 217 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 TOX2Q96NM4 488 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 TAAR1Q96RJ0 339 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 PIGSQ96S52 555 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 PRDM5Q9NQX1 630 aaPredicted RBP19.86■□□□□ 0.77
SSBP1-207ENST00000468267 COL20A1Q9P218 1284 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 PCDHA1Q9Y5I3 950 aa19.86■□□□□ 0.77
SSBP1-207ENST00000468267 TRIM43BA6NCK2 446 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 SH2B2O14492 632 aaPredicted RBP19.85■□□□□ 0.77
SSBP1-207ENST00000468267 PQBP1O60828 265 aaKnown RBP19.85■□□□□ 0.77
SSBP1-207ENST00000468267 DDAH1O94760 285 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 LIFRP42702 1097 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 CDK7P50613 346 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 GHRHRQ02643 423 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 TRAF1Q13077 416 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 HOMER1Q86YM7 354 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 TDHQ8IZJ6 230 aa19.85■□□□□ 0.77
SSBP1-207ENST00000468267 NSUN6Q8TEA1 469 aaKnown RBP19.85■□□□□ 0.77
SSBP1-207ENST00000468267 TRIM43Q96BQ3 446 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms