RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 RTP1P59025 263 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 NFXL1Q6ZNB6 911 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 KLHDC9Q8NEP7 349 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
COMMD3-206ENST00000468179 KATNBL1Q9H079 304 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 UPF3AQ9H1J1 476 aaKnown RBP16.98■□□□□ 0.31
COMMD3-206ENST00000468179 Q9Y3F1 56 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 TAF6LQ9Y6J9 622 aa16.98■□□□□ 0.31
COMMD3-206ENST00000468179 CCDC69A6NI79 296 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 ZEB2O60315 1214 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 DDAH1O94760 285 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 CALM1P0DP23 149 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 CALM2P0DP24 149 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 CALM3P0DP25 149 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 GNAQP50148 359 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 ACLYP53396 1101 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 ANTXR2P58335 489 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 PDE4DQ08499 809 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 TROAPQ12815 778 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 KRT32Q14532 448 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 KCNA10Q16322 511 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 SLC30A10Q6XR72 485 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 LZTS2Q9BRK4 669 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 MAP3K20Q9NYL2 800 aaKnown RBP16.97■□□□□ 0.31
COMMD3-206ENST00000468179 ATP11BQ9Y2G3 1177 aa16.97■□□□□ 0.31
COMMD3-206ENST00000468179 SYN1P17600 705 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 BMP8BP34820 402 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 LIFRP42702 1097 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 NKX3-2P78367 333 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 SNX17Q15036 470 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 LENG1Q96BZ8 264 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-206ENST00000468179 MTMR8Q96EF0 704 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 GLT1D1Q96MS3 346 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 LBHD1Q9BQE6 289 aaPredicted RBP16.96■□□□□ 0.31
COMMD3-206ENST00000468179 RIOX1Q9H6W3 641 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
COMMD3-206ENST00000468179 RBM27Q9P2N5 1060 aaKnown RBP16.96■□□□□ 0.31
COMMD3-206ENST00000468179 MKI67P46013 3256 aaKnown RBP16.96■□□□□ 0.3
COMMD3-206ENST00000468179 A0A1W2PQ45 241 aaPredicted RBP16.96■□□□□ 0.3
COMMD3-206ENST00000468179 A0A1W2PQY0 241 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 CABYRO75952 493 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 SMARCA1P28370 1054 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 TAPT1Q6NXT6 567 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 EEPD1Q7L9B9 569 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 FBXO16Q8IX29 292 aaPredicted RBP16.96■□□□□ 0.3
COMMD3-206ENST00000468179 ZNF654Q8IZM8 581 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 NSUN6Q8TEA1 469 aaKnown RBP16.96■□□□□ 0.3
COMMD3-206ENST00000468179 IWS1Q96ST2 819 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 LY9Q9HBG7 655 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 PPP4R2Q9NY27 417 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 PCDHA1Q9Y5I3 950 aa16.96■□□□□ 0.3
COMMD3-206ENST00000468179 FRMPD3Q5JV73 1810 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 ASTN1O14525 1302 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 ELP1O95163 1332 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 PNMA6FA0A0J9YX94 578 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 SH2B2O14492 632 aaPredicted RBP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 HMGB1P09429 215 aaKnown RBP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 TRIM60Q495X7 471 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 DUSP28Q4G0W2 176 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 CCSAPQ6IQ19 270 aaPredicted RBP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 TLK2Q86UE8 772 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 NEK1Q96PY6 1258 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 PURBQ96QR8 312 aaKnown RBP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 GDF15Q99988 308 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 SEZ6LQ9BYH1 1024 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 WDR11Q9BZH6 1224 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 PRO3102Q9H379 93 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 GNEQ9Y223 722 aaKnown RBP16.95■□□□□ 0.3
COMMD3-206ENST00000468179 SLC12A7Q9Y666 1083 aa16.95■□□□□ 0.3
COMMD3-206ENST00000468179 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-206ENST00000468179 DCDC2CA8MYV0 355 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 DYNC1LI2O43237 492 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-206ENST00000468179 REC8O95072 547 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 CFBP00751 764 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 ASGR1P07306 291 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 SMPD1P17405 629 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 EDNRBP24530 442 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 MAGEA10P43363 369 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-206ENST00000468179 BRDTQ58F21 947 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-206ENST00000468179 ARHGEF16Q5VV41 709 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 SYTL5Q8TDW5 730 aaPredicted RBP16.94■□□□□ 0.3
COMMD3-206ENST00000468179 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 SENP2Q9HC62 589 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
COMMD3-206ENST00000468179 RBM47A0AV96 593 aaKnown RBP16.93■□□□□ 0.3
COMMD3-206ENST00000468179 STXBP2Q15833 593 aa16.93■□□□□ 0.3
COMMD3-206ENST00000468179 FSCN1Q16658 493 aaKnown RBP16.93■□□□□ 0.3
COMMD3-206ENST00000468179 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms