RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 ERC2O15083 957 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 ATP2A2P16615 1042 aaKnown RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 RABGGTBP53611 331 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 AAK1Q2M2I8 961 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 TSHZ3Q63HK5 1081 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 KIAA1211Q6ZU35 1233 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 RANBP17Q9H2T7 1088 aaKnown RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 PNMA2Q9UL42 364 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 TNKSO95271 1327 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 COL4A4P53420 1690 aaPredicted RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 KIAA1217Q5T5P2 1943 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 TSPY2A6NKD2 308 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 ZBBXA8MT70 800 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 ACTN1P12814 892 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 PTGS1P23219 599 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 CPT1AP50416 773 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 ALDH5A1P51649 535 aaPredicted RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 NSMFQ6X4W1 530 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 EEPD1Q7L9B9 569 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 SCLYQ96I15 445 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 SLC9A7Q96T83 725 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 MTG1Q9BT17 334 aaPredicted RBP10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 IL17RBQ9NRM6 502 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 ANAPC4Q9UJX5 808 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 STX8Q9UNK0 236 aa10.59□□□□□ -0.71
PTPDC1-203ENST00000467049 TET1Q8NFU7 2136 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 NKRFO15226 690 aaKnown RBP eCLIP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 ORC4O43929 436 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 KPNA6O60684 536 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 BMP1P13497 986 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 SNAP25P60880 206 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 PURAQ00577 322 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 PTPN11Q06124 597 aaPredicted RBP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 TMEM63BQ5T3F8 832 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 PI4K2BQ8TCG2 481 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 FSD1Q9BTV5 496 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 PRRC2BQ5JSZ5 2229 aaKnown RBP10.58□□□□□ -0.72
PTPDC1-203ENST00000467049 FGRP09769 529 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 MYOGP15173 224 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 BAATQ14032 418 aaPredicted RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 TTLL4Q14679 1199 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 CCDC96Q2M329 555 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 BRDTQ58F21 947 aaPredicted RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 TMEM67Q5HYA8 995 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 C20orf194Q5TEA3 1177 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 SYDE2Q5VT97 1194 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 OR6J1Q8NGC5 347 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 PHOSPHO2Q8TCD6 241 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 TRMT13Q9NUP7 481 aaKnown RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 MYH6P13533 1939 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 RAD50Q92878 1312 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 PITPNM1O00562 1244 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 FOXP2O15409 715 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 GTPBP6O43824 516 aaPredicted RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 MYL3P08590 195 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 CYP2C9P11712 490 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 PLA2G5P39877 138 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 ALX1Q15699 326 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 NFRKBQ6P4R8 1299 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 PURBQ96QR8 312 aaKnown RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 MPHOSPH6Q99547 160 aaKnown RBP10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 C1QTNF1Q9BXJ1 281 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 MTCH2Q9Y6C9 303 aa10.57□□□□□ -0.72
PTPDC1-203ENST00000467049 CDH23Q9H251 3354 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 WDR19Q8NEZ3 1342 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 NMT2O60551 498 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 TOP1P11387 765 aaKnown RBP10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 EDNRBP24530 442 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 RASGRP2Q7LDG7 609 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 MICALL1Q8N3F8 863 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 RETREG2Q8NC44 543 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 YTHDC1Q96MU7 727 aaKnown RBP10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 COG5Q9UP83 839 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 SIP14410 1827 aa10.56□□□□□ -0.72
PTPDC1-203ENST00000467049 NFIBO00712 420 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 RANBP6O60518 1105 aaKnown RBP10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 BAIAP3O94812 1187 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 CA3P07451 260 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 BFSP2Q13515 415 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 PPP2R5BQ15173 497 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 SLC30A10Q6XR72 485 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 DEFB128Q7Z7B8 93 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 DNERQ8NFT8 737 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 SCFD2Q8WU76 684 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 CLEC4DQ8WXI8 215 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 CHMP4CQ96CF2 233 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 MAF1Q9H063 256 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 TCP11L1Q9NUJ3 509 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 RAPGEFL1Q9UHV5 662 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 LAMA4Q16363 1823 aa10.55□□□□□ -0.72
PTPDC1-203ENST00000467049 MYH7BA7E2Y1 1941 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms