RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 NCAM1P13591 858 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 SEPHS1P49903 392 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 FOXO4P98177 505 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 LZTR1Q8N653 840 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 TEPSINQ96N21 525 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 MCMBPQ9BTE3 642 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 PCDHB10Q9UN67 800 aa6.72□□□□□ -1.33
CHMP2B-202ENST00000466696 TRBV23OR9-2A0A075B6M9 112 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 C2orf71A6NGG8 1288 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 ATF2P15336 505 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 KCNC1P48547 511 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 AMPD2Q01433 879 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 GRB10Q13322 594 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 PPP2R5EQ16537 467 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 DPY19L1Q2PZI1 675 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 ARHGEF39Q8N4T4 335 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 FGD4Q96M96 766 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 CGGBP1Q9UFW8 167 aaPredicted RBP6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 SUSD2Q9UGT4 822 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 NUDT5Q9UKK9 219 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 BACE2Q9Y5Z0 518 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 PMF1-BGLAPU3KQ54 211 aa6.71□□□□□ -1.34
CHMP2B-202ENST00000466696 VAMP4O75379 141 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 CELA3BP08861 270 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 GJA8P48165 433 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 SLURP1P55000 103 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 TRIM26Q12899 539 aaPredicted RBP6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 FNIP1Q8TF40 1166 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 KLHL6Q8WZ60 621 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 ALG3Q92685 438 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 TSPAN17Q96FV3 270 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 PEX11GQ96HA9 241 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 SUGT1Q9Y2Z0 365 aa6.7□□□□□ -1.34
CHMP2B-202ENST00000466696 NPHP3-ACAD11A0A0J9YXS1 232 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 ASGR2P07307 311 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 PAMP19021 973 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 CASP7P55210 303 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 SLC9A5Q14940 896 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 NT5DC4Q86YG4 428 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 NETO2Q8NC67 525 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 CPLX3Q8WVH0 158 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
CHMP2B-202ENST00000466696 ANKRD34BA5PLL1 514 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 NASPP49321 788 aaPredicted RBP6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 HTRA3P83110 453 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 SKOR2Q2VWA4 1001 aaPredicted RBP6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 VWA3BQ502W6 1294 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 B3GNT8Q7Z7M8 397 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 SAPCD2Q86UD0 394 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 SHDQ96IW2 340 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 SEC16BQ96JE7 1060 aa6.68□□□□□ -1.34
CHMP2B-202ENST00000466696 ZBTB7AO95365 584 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 KIAA1211LQ6NV74 962 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 LIPIQ6XZB0 460 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 CPNE8Q86YQ8 564 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 CRACR2BQ8N4Y2 399 aaPredicted RBP6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 USP33Q8TEY7 942 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 MTA3Q9BTC8 594 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 ADAM7Q9H2U9 754 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 AKT3Q9Y243 479 aa6.67□□□□□ -1.34
CHMP2B-202ENST00000466696 SH3D21A4FU49 640 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 NPHS1O60500 1241 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 NAT2P11245 290 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 PMLP29590 882 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 MC3RP41968 323 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 POMZP3Q6PJE2 187 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 VHLLQ6RSH7 139 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 PRRT2Q7Z6L0 340 aaPredicted RBP6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 CPA5Q8WXQ8 436 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 RXFP1Q9HBX9 757 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 GULP1Q9UBP9 304 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 FBLN5Q9UBX5 448 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 STRIP2Q9ULQ0 834 aa6.66□□□□□ -1.34
CHMP2B-202ENST00000466696 C7orf72A4D263 438 aa6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 ZNF143P52747 638 aaPredicted RBP6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 WWC2Q6AWC2 1192 aa6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 DBX2Q6ZNG2 339 aa6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 ZNF526Q8TF50 670 aaPredicted RBP6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 APBA2Q99767 749 aa6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 USP40Q9NVE5 1235 aa6.65□□□□□ -1.34
CHMP2B-202ENST00000466696 KCNH1O95259 989 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 CACNB2Q08289 660 aaPredicted RBP6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 ZFYVE27Q5T4F4 411 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 C9orf131Q5VYM1 1079 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 ADGRG2Q8IZP9 1017 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 ZNF513Q8N8E2 541 aaPredicted RBP6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 BVESQ8NE79 360 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 COPS5Q92905 334 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 MRRFQ96E11 262 aaKnown RBP6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 MMP19Q99542 508 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms